Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05848 and BPUM_3479
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:26
# Commandline: needle
# -asequence pep-align/BSNT_05848___ywcA.1.24716.seq
# -bsequence pep-align/BPUM_3479___ywcA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05848___ywcA-BPUM_3479___ywcA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05848___ywcA-BPUM_3479___ywcA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05848___ywcA
# 2: BPUM_3479___ywcA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 514
# Identity: 429/514 (83.5%)
# Similarity: 476/514 (92.6%)
# Gaps: 2/514 ( 0.4%)
# Score: 2170.0
#
#
#=======================================
BSNT_05848___ 1 MNMTAFLLFLAIVGLTLIITYFAAKRTKTTSEFYTAGGGLTGVQNGLAIA 50
|:||||:||:|||||||:|||||||:|...|:||||||||||.|||||||
BPUM_3479___y 1 MSMTAFILFIAIVGLTLVITYFAAKKTSNASDFYTAGGGLTGFQNGLAIA 50
BSNT_05848___ 51 GDYMSAASFLGIAGMIALYGFDGFFYSIGFLVAYLVVLYIVAEPLRNLGK 100
||||||||||||||||||.||||||||||||||||||||:||||||||||
BPUM_3479___y 51 GDYMSAASFLGIAGMIALNGFDGFFYSIGFLVAYLVVLYVVAEPLRNLGK 100
BSNT_05848___ 101 YTMADMIAARFKEKKIRGVAALNTIAISTFYMIAQLVGAGALIKLLLGLD 150
||||||||||||...||||||.|||.:|||||||||||||||||||||:|
BPUM_3479___y 101 YTMADMIAARFKRPAIRGVAAFNTITVSTFYMIAQLVGAGALIKLLLGID 150
BSNT_05848___ 151 YTAAVLIVGVLMTIYVVFGGMIATSWVQIIKAVLLMAGTLVISIIVFSKF 200
|..||||||||||||||||||||||||||.||||||.|||:||::||:||
BPUM_3479___y 151 YWIAVLIVGVLMTIYVVFGGMIATSWVQITKAVLLMLGTLIISLLVFAKF 200
BSNT_05848___ 201 GFSLNTMFEQMKTATPLGADFLNPGNKYKVPLETLSLNLALVLGTAGLPH 250
.|||..|||:||||||||..||:|||||.|||||||||||||||||||||
BPUM_3479___y 201 DFSLLKMFEEMKTATPLGGSFLHPGNKYDVPLETLSLNLALVLGTAGLPH 250
BSNT_05848___ 251 ILIRFYTVKDAKTARTSVVSATWIIGVFYIMTVFLGFGAAAFVGFDAITA 300
|||||||||||.:||.||:|||||||:||:||||||||||||||.|||||
BPUM_3479___y 251 ILIRFYTVKDAISARKSVLSATWIIGIFYLMTVFLGFGAAAFVGTDAITA 300
BSNT_05848___ 301 ADQAGNMAAPLLAKALGGDFLFAFVSAIAFATILAVVTGLVLSAASAFAH 350
.|.||||||||||:|||||.||||||||||||||||||||||||||||||
BPUM_3479___y 301 EDAAGNMAAPLLAQALGGDLLFAFVSAIAFATILAVVTGLVLSAASAFAH 350
BSNT_05848___ 351 DIYSQIIRKGEATEKEQMKAARWASVAVSVLSILLAIFAQSLNVAFLVAL 400
|.||||:|||:|:|:||:||||:||:.|::|||:||:|||||||||||:|
BPUM_3479___y 351 DFYSQIVRKGKASEREQVKAARFASIGVAILSIILALFAQSLNVAFLVSL 400
BSNT_05848___ 401 AFAVAASANLPLIVFTVFWKRFNASGALWGSLTGLISALVLVSMSPSVWD 450
|||||||||||||:|||||||||::||:.|||.||:|||::||:||||||
BPUM_3479___y 401 AFAVAASANLPLIIFTVFWKRFNSTGAIAGSLVGLLSALIIVSLSPSVWD 450
BSNT_05848___ 451 PAGGAIFTGDPLIPLSNPGIISIPLGFLGAWLGTMLSSDKTIDEDTFAEI 500
|:|.||||||||||||||||||||||||.|:|||:.||:|. |||||.||
BPUM_3479___y 451 PSGAAIFTGDPLIPLSNPGIISIPLGFLAAYLGTIFSSEKA-DEDTFTEI 499
BSNT_05848___ 501 QVKAHTGVHMEQE- 513
|||||||:||:.:
BPUM_3479___y 500 QVKAHTGMHMDTDS 513
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