Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05864 and BPUM_3488
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:26
# Commandline: needle
# -asequence pep-align/BSNT_05864___ywbD.1.24716.seq
# -bsequence pep-align/BPUM_3488___ywbD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05864___ywbD-BPUM_3488___ywbD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05864___ywbD-BPUM_3488___ywbD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05864___ywbD
# 2: BPUM_3488___ywbD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 395
# Identity: 268/395 (67.8%)
# Similarity: 327/395 (82.8%)
# Gaps: 2/395 ( 0.5%)
# Score: 1432.0
#
#
#=======================================
BSNT_05864___ 1 MKLLTLKKAHAAKIKKGYPLIEKEALAGSAGHMKEGDIVDIVSESGEFLA 50
||.::||:..|.::|||||||.|:|:: ....:|||::::.|.|.|.||.
BPUM_3488___y 1 MKKISLKQTFAEQLKKGYPLISKDAVS-HVSSVKEGELIEWVDERGAFLG 49
BSNT_05864___ 51 RGYYGLQNKGVGWTLTRNKHEQIDQAFFLTKLTKAAQARAKLFEAQDTTA 100
:||||:||||:||.||.:.:|:||.|||::||.:||::|..||....|||
BPUM_3488___y 50 KGYYGVQNKGIGWVLTFDANEKIDHAFFVSKLEQAAKSRTHLFRDAQTTA 99
BSNT_05864___ 101 FRLFNGEGDGVGGVTIDYYDGYLLVQWYSKGIYTFKDMLISALDEMDLDY 150
||:|||||||:||.|||:|||:.|:||||:|:||||..::.||:.:..||
BPUM_3488___y 100 FRVFNGEGDGIGGFTIDHYDGFYLIQWYSEGVYTFKAEVLGALEHVYPDY 149
BSNT_05864___ 151 KAIYEKKRFDTAGQYVEDDDFVKGKRGEFPIIIQENGIQYAVDLNEGAMT 200
|.|||||||||:|||:||||||||::||||:|::|||:..||.||:||||
BPUM_3488___y 150 KGIYEKKRFDTSGQYIEDDDFVKGEKGEFPLIVKENGMNIAVYLNDGAMT 199
BSNT_05864___ 201 GIFLDQRHVRKAIRDRYAKGKTVLNTFSYTGAFSVAAALGGAEKTTSVDV 250
||||||||||||||||||||||||||||||||||||||||||.:||||||
BPUM_3488___y 200 GIFLDQRHVRKAIRDRYAKGKTVLNTFSYTGAFSVAAALGGASRTTSVDV 249
BSNT_05864___ 251 ANRSLAKTIEQFSVNKLDYEAHDIKVMDVFNYFSYAEKKDLRFDLIILDP 300
|||||.||.|||.||.:|.:..||||||||.||.:|.||...:||:||||
BPUM_3488___y 250 ANRSLKKTSEQFEVNDIDVDGQDIKVMDVFKYFPFAAKKGWTYDLVILDP 299
BSNT_05864___ 301 PSFARTKKRTFSAAKDYKNLLKETIAITADKGVIVASTNSSAFGMKKFKG 350
||||||||.|||||||||.||||.|.|||:.|||||||||||||||||||
BPUM_3488___y 300 PSFARTKKHTFSAAKDYKKLLKEAIQITAENGVIVASTNSSAFGMKKFKG 349
BSNT_05864___ 351 FIDAAFKETNERYTIIEEFTLPKDFKTISAFPEGNYLKVVLLQKK 395
||..||||:.:.|.|:||:|||:||:|...:|||||||||.:|.
BPUM_3488___y 350 FIAQAFKESGQTYRILEEYTLPEDFRTTKNYPEGNYLKVVFIQA- 393
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