Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05932 and BPUM_3519
See
DNA alignment /
Visit
BSNT_05932 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:29
# Commandline: needle
# -asequence pep-align/BSNT_05932___cydA.1.24716.seq
# -bsequence pep-align/BPUM_3519___cydA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05932___cydA-BPUM_3519___cydA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05932___cydA-BPUM_3519___cydA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05932___cydA
# 2: BPUM_3519___cydA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 472
# Identity: 360/472 (76.3%)
# Similarity: 413/472 (87.5%)
# Gaps: 5/472 ( 1.1%)
# Score: 1930.0
#
#
#=======================================
BSNT_05932___ 1 MSELVLARIQFASTTLFHFLFVPMSIGLVFMVALMETLYLVKKNELYLKM 50
||||.|||.||||||||||:||||||||||:||||:|||:|||.|:|.||
BPUM_3519___c 1 MSELFLARFQFASTTLFHFIFVPMSIGLVFIVALMQTLYVVKKKEIYKKM 50
BSNT_05932___ 51 AKFWGHLFLINFAVGVVTGILQEFQFGLNWSDYSRFVGDVFGAPLAIEAL 100
|||||||||:|||||||||||||||||:||||||||||||||||||||||
BPUM_3519___c 51 AKFWGHLFLLNFAVGVVTGILQEFQFGMNWSDYSRFVGDVFGAPLAIEAL 100
BSNT_05932___ 101 LAFFMESIFIGLWIFGWDRLPKKIHALCIWLVSFGTIMSSFWILTANSFM 150
||||:||.|||||||||||||||||.|||||||.|||.|:||||.|||||
BPUM_3519___c 101 LAFFLESTFIGLWIFGWDRLPKKIHLLCIWLVSIGTIFSAFWILLANSFM 150
BSNT_05932___ 151 QEPVGFTIKNGRAEMNDFGALITNPQLWVEFPHVIFGALATGAFFIAGVS 200
||||||.||||||||||||||:||||||||||||:|||||||||||||||
BPUM_3519___c 151 QEPVGFVIKNGRAEMNDFGALVTNPQLWVEFPHVLFGALATGAFFIAGVS 200
BSNT_05932___ 201 AFKLLKKKEVPFFKQSFKLAMIVGLCAGLGVGLSGHMQAEHLMESQPMKM 250
|:|::||:|:.|||:||::||::.|.:||||..|||.||:||||||||||
BPUM_3519___c 201 AYKMIKKQEIAFFKKSFQIAMVLALISGLGVAFSGHDQAKHLMESQPMKM 250
BSNT_05932___ 251 AASEGLWEDSGDPAAWTAFATIDTKNEKSSNEIKVPYALSYLAYQKFSGS 300
||||.||:|||||||||.||.|||..:::|.||.:|:|||||||.||||.
BPUM_3519___c 251 AASEALWKDSGDPAAWTLFANIDTDKKENSAEINIPFALSYLAYSKFSGD 300
BSNT_05932___ 301 VKGMKTLQAEYEKIYGKGDYIPPVKTTFWSFRIMVGAGVVMILAALGGLW 350
|.||.:||.|||..:|.|||||||||||||||||||||::||.|::.||:
BPUM_3519___c 301 VPGMLSLQKEYEAKFGPGDYIPPVKTTFWSFRIMVGAGMLMIFASMIGLY 350
BSNT_05932___ 351 LNRRKKLENSKWYLRIMIALISFPFLANSAGWIMTEIGRQPWTVMGLMTT 400
|:.|||||.:||:||.|:.:|:|||:||||||||||||||||||.|:|||
BPUM_3519___c 351 LSFRKKLETNKWFLRFMVGMIAFPFIANSAGWIMTEIGRQPWTVFGMMTT 400
BSNT_05932___ 401 AQSVSPNVTAGSLLFSIIAFGVMYMILGALLVFLFIREIKKGA---EHSD 447
|||:||||:.|.||||:|:|..:|:||..||.:|||||||||| |.:|
BPUM_3519___c 401 AQSISPNVSYGMLLFSVISFTTIYLILAILLAYLFIREIKKGAHSEEDTD 450
BSNT_05932___ 448 HHD-VPVSTDPFSQEVYHGISS 468
..| ..:|||||....|||||
BPUM_3519___c 451 QKDETDLSTDPFDGGAYHGIS- 471
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.