Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05527 and BPUM_3569
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:08
# Commandline: needle
# -asequence pep-align/BSNT_05527.1.24716.seq
# -bsequence pep-align/BPUM_3569___ywqG.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05527-BPUM_3569___ywqG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05527-BPUM_3569___ywqG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05527
# 2: BPUM_3569___ywqG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 271
# Identity: 77/271 (28.4%)
# Similarity: 108/271 (39.9%)
# Gaps: 118/271 (43.5%)
# Score: 408.0
#
#
#=======================================
BSNT_05527 0 -------------------------------------------------- 0
BPUM_3569___y 1 MTQSAKLQEIIAPYRKMLDQTEQPMIQLQMKQGKTGPYDSKIAGDPYFPK 50
BSNT_05527 0 -------------------------------------------------- 0
BPUM_3569___y 51 NDEYPVDGEGHPMKLLAQINFGQLPKLKDYPETGLLQIFISVHDDLYGMN 100
BSNT_05527 1 -----------MIYFENIIENEDELVSDFSFIG-TGECDFPILSEAAVEP 38
:.:.|.....|:||::||||:. ..:..||:..|.|:..
BPUM_3569___y 101 IDHKTEQKDFRIKFIEEPFLAEEELLTDFSFVKIPDDFYFPVTKEGAITG 150
BSNT_05527 39 VKSSEWVLPTDFQFEQYTGMETMEFF----GQFGEDEEDIYNEL--AENG 82
.:|||.:...||:||:.||....:.| |..|::.:.:.:|. .|:|
BPUM_3569___y 151 ERSSETISVGDFRFEKITGKHAWDLFEGVEGIDGDEADALLDEFYETESG 200
BSNT_05527 83 FGHKIGGYASFTQHDPREYAYKEHTIMLLQIDSDDDIDSMWGDVGIANFF 132
||||:|||..|||.|||.|..:|||::||||||||::|.||||.||||||
BPUM_3569___y 201 FGHKLGGYPGFTQEDPRTYVDQEHTVLLLQIDSDDEVDLMWGDCGIANFF 250
BSNT_05527 133 ITPDDLRKKDFSNVLYNWDCS 153
|.|:||::|:|.||:||||||
BPUM_3569___y 251 IKPEDLKRKNFENVVYNWDCS 271
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