Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06218 and BPUM_3703

See DNA alignment / Visit BSNT_06218 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:40
# Commandline: needle
#    -asequence pep-align/BSNT_06218___yycC.1.24716.seq
#    -bsequence pep-align/BPUM_3703___yycC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06218___yycC-BPUM_3703___yycC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06218___yycC-BPUM_3703___yycC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06218___yycC
# 2: BPUM_3703___yycC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 56
# Identity:      38/56 (67.9%)
# Similarity:    44/56 (78.6%)
# Gaps:          10/56 (17.9%)
# Score: 186.0
# 
#
#=======================================

BSNT_06218___      1 --------MRPLQISAETAQKLAESLNLPLEQIMHMPQHILLAKMAEL-Q     41
                             ||||||||:||||||.|||:|:|||||||||||:||:||| |
BPUM_3703___y      1 MKEEGDLRMRPLQISADTAQKLAASLNVPIEQIMHMPQHILIAKLAELEQ     50

BSNT_06218___     42 KEDKS-     46
                     |:|.| 
BPUM_3703___y     51 KKDHSS     56


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