Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06219 and BPUM_3704
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:40
# Commandline: needle
# -asequence pep-align/BSNT_06219___yycB.1.24716.seq
# -bsequence pep-align/BPUM_3704.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06219___yycB-BPUM_3704.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06219___yycB-BPUM_3704.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06219___yycB
# 2: BPUM_3704
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 411
# Identity: 247/411 (60.1%)
# Similarity: 309/411 (75.2%)
# Gaps: 18/411 ( 4.4%)
# Score: 1282.0
#
#
#=======================================
BSNT_06219___ 1 --------MPHPHNKKIQSFWLITGIIFIAFNLRPAITSVGPVISSIRAE 42
..||.:|. |:..||.||:.||||||||||||||:|.:||::
BPUM_3704 1 MEQQLEQSTLHPRSKG-QTILLIAGILLIAFNLRPAITSVGPLIGAIRSD 49
BSNT_06219___ 43 LHMSNGAAGFLTALPLLSFAVLSPLAPKLGQRLGNERTLWLGLVILLIGV 92
|.:|||.|||||.|||||||:|||:.||:|:||||||||||||.:||.|:
BPUM_3704 50 LQLSNGLAGFLTTLPLLSFALLSPITPKIGKRLGNERTLWLGLAVLLFGI 99
BSNT_06219___ 93 LTRSTGYTAALFFGTALIGVGIAIGNVLLPSLIKHKYPEKPGIVISLYTT 142
:.||.|....|..|||||||||||.|||||.|:|||:|...|::.|:|||
BPUM_3704 100 VIRSFGSITFLMIGTALIGVGIAICNVLLPGLVKHKFPAHAGLMTSVYTT 149
BSNT_06219___ 143 SMNIFAALASGVSVPLATQMDGGWKQAFLLWGGLALLALLIWIPQLRHRD 192
||::||||||||||||:..|.|||..:||:|.||||||:::|.|||.|::
BPUM_3704 150 SMSVFAALASGVSVPLSHAMPGGWNTSFLVWAGLALLAMMVWAPQLLHQN 199
BSNT_06219___ 193 TAN-QTMKLQSSSIWASKMAWYVTIFMGLQSFLFYSSIAWFPEILRSHGI 241
||. :::.|....||.|::||.||:|||||||||||||||||:||.|||:
BPUM_3704 200 TAAVKSISLTEQPIWRSRVAWQVTLFMGLQSFLFYSSIAWFPDILTSHGM 249
BSNT_06219___ 242 DTATAGWMVSLMQFASLPSTFLTPVLADRVKQQRGIVAALASVYLIGLCG 291
:.:|||||:|:|||..||||||.||.|:::|.||.:|..|..|||:|:.|
BPUM_3704 250 NLSTAGWMLSIMQFVGLPSTFLAPVFAEKLKTQRPLVFGLVLVYLLGMIG 299
BSNT_06219___ 292 LLAGGSHTLLAIWMIIIGIGQGSSISLALTLIGLRSENAQQAAALSGMSQ 341
||.|||..:|.|.:::||||||:|||||||.||||:.|.:||||||||:|
BPUM_3704 300 LLLGGSTPILVISVLLIGIGQGASISLALTFIGLRTTNMEQAAALSGMAQ 349
BSNT_06219___ 342 SFGYLLAAVGPIFVGYLFDQTHSWTMPIVLLIAALIVMGAAGQRAGRDRY 391
|.|||||||||:.:|.|||.||:||..|::.|..|..|..:|.||||..|
BPUM_3704 350 SIGYLLAAVGPLMIGILFDVTHTWTPSIIIFIIVLFFMFLSGMRAGRSVY 399
BSNT_06219___ 392 IFQSEKQRNSA 402
|..
BPUM_3704 400 ISD-------- 402
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