Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03186 and BPUM_3715
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:40
# Commandline: needle
# -asequence pep-align/BSNT_03186.1.24716.seq
# -bsequence pep-align/BPUM_3715.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03186-BPUM_3715.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03186-BPUM_3715.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03186
# 2: BPUM_3715
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 330
# Identity: 81/330 (24.5%)
# Similarity: 117/330 (35.5%)
# Gaps: 134/330 (40.6%)
# Score: 386.0
#
#
#=======================================
BSNT_03186 0 -------------------------------------------------- 0
BPUM_3715 1 MNRGLLLHDRRSLEVKKTEGIHHITAIVGHPQENVDFYAGVLGLRLVKKT 50
BSNT_03186 0 -------------------------------------------------- 0
BPUM_3715 51 VNFDDPGTYHLYFGNEGGSPGTIITFFPWPGAQKGQIGAGQVGVTTYVVP 100
BSNT_03186 1 ----------------------MFGEKGLIFDDTEDLPLAIMEDAKSGKS 28
.|.|..|.|:|...|.:.::|.|:..::
BPUM_3715 101 PGAFSFWKERLEQFDISYEMVERFDEAFLSFEDPHGLLIELVERAEGKQN 150
BSNT_03186 29 EWTPDGITTNEAITGMKGVLLYSYDPQATIQLLTESFGYTKVAEEDQIVR 78
:||.:|:|.:.||.|..|.:|.:..|:.|:|||.::.|:.:|..|:..||
BPUM_3715 151 DWTFNGVTPDVAIKGFGGAVLLTSQPEQTMQLLEQTMGFERVGAEEDYVR 200
BSNT_03186 79 LATSAAVGGVIDVHLHPEKRGVGGYGTVHHIAFR-TKKNEQAKWLPIIAE 127
..:...:|.||||:..|..||..|.|.|||||:| |...:|..|...||:
BPUM_3715 201 FRSFGEIGNVIDVNKTPVARGRMGVGVVHHIAWRATDDQDQLDWQRHIAQ 250
BSNT_03186 128 NHLPSSEILDREYFTSVYFREKGGILFEIATDEPGFMTDETFSELGTSLK 177
:....:.:.||.||.::||||.||||||||||.|||..||:...:|.:||
BPUM_3715 251 SGYQVTPVQDRNYFNAIYFRELGGILFEIATDPPGFAHDESVETMGEALK 300
BSNT_03186 178 LPEWLEKHRHQITDILPEL----------- 196
||...|..|.||..|:..:
BPUM_3715 301 LPPQYEAQRSQIEQIVLPIEVRELKGKGDA 330
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