Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_00004 and BSU00040

See DNA alignment / Visit BSNT_00004 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:15:49
# Commandline: needle
#    -asequence pep-align/BSNT_00004___recF.1.22522.seq
#    -bsequence pep-align/BSU00040___recF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00004___recF-BSU00040___recF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00004___recF-BSU00040___recF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00004___recF
# 2: BSU00040___recF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 370
# Identity:     368/370 (99.5%)
# Similarity:   370/370 (100.0%)
# Gaps:           0/370 ( 0.0%)
# Score: 1871.0
# 
#
#=======================================

BSNT_00004___      1 MYIQNLELSSYRNYDHAELQFENKVNVIIGENAQGKTNLMEAIYVLSMAK     50
                     ||||||||:|||||||||||||||||||||||||||||||||||||||||
BSU00040___re      1 MYIQNLELTSYRNYDHAELQFENKVNVIIGENAQGKTNLMEAIYVLSMAK     50

BSNT_00004___     51 SHRTSNDKELIRWDKDYAKIEGRVMKQNGAIPMQLVISKKGKKGKVNHIE    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00040___re     51 SHRTSNDKELIRWDKDYAKIEGRVMKQNGAIPMQLVISKKGKKGKVNHIE    100

BSNT_00004___    101 QQKLSQYVGALNTIMFAPEDLNLVKGSPQVRRRFLDMEIGQVSPVYLHDL    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00040___re    101 QQKLSQYVGALNTIMFAPEDLNLVKGSPQVRRRFLDMEIGQVSPVYLHDL    150

BSNT_00004___    151 SLYQKILSQRNHFLKQLQTRKQTDRTMLDVLTDQLIEVAAKVVVKRLQFT    200
                     |||||||||||||||||||||||||||||||||||:||||||||||||||
BSU00040___re    151 SLYQKILSQRNHFLKQLQTRKQTDRTMLDVLTDQLVEVAAKVVVKRLQFT    200

BSNT_00004___    201 AQLEKWAQPIHAGISRGLEELTLKYHTALDVSDPLDLSKIGDSYQEAFSK    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00040___re    201 AQLEKWAQPIHAGISRGLEELTLKYHTALDVSDPLDLSKIGDSYQEAFSK    250

BSNT_00004___    251 LREKEIERGVTLSGPHRDDVLFYVNGRDVQTYGSQGQQRTTALSLKLAEI    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00040___re    251 LREKEIERGVTLSGPHRDDVLFYVNGRDVQTYGSQGQQRTTALSLKLAEI    300

BSNT_00004___    301 DLIHEEIGEYPILLLDDVLSELDDYRQSHLLHTIQGRVQTFVTTTSVDGI    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00040___re    301 DLIHEEIGEYPILLLDDVLSELDDYRQSHLLHTIQGRVQTFVTTTSVDGI    350

BSNT_00004___    351 DHETLRQAGMFRVQNGALVK    370
                     ||||||||||||||||||||
BSU00040___re    351 DHETLRQAGMFRVQNGALVK    370


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.