Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00350 and BSU01800
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:22
# Commandline: needle
# -asequence pep-align/BSNT_00350.1.22522.seq
# -bsequence pep-align/BSU01800___alkA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00350-BSU01800___alkA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00350-BSU01800___alkA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00350
# 2: BSU01800___alkA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 303
# Identity: 176/303 (58.1%)
# Similarity: 176/303 (58.1%)
# Gaps: 126/303 (41.6%)
# Score: 941.0
#
#
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BSNT_00350 1 MAWHEVNDVIVITLPEIFDMNANLGYLTREKNECMYEIENNIITKVIAIG 50
|.||||||||||||||||||||||||||||||||||||||||||||||||
BSU01800___al 1 MTWHEVNDVIVITLPEIFDMNANLGYLTREKNECMYEIENNIITKVIAIG 50
BSNT_00350 51 EIRSLVQVSVINNKQMIVQFLNDSRPVEQWKREEIVKYIHEWFDLDNDLT 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01800___al 51 EIRSLVQVSVINNKQMIVQFLNDSRPVEQWKREEIVKYIHEWFDLDNDLT 100
BSNT_00350 101 PFYEMAKADPLLKMPARKFYGLRVIGIPDLFEALCWGVLGQQINLAFAYS 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01800___al 101 PFYEMAKADPLLKMPARKFYGLRVIGIPDLFEALCWGVLGQQINLAFAYS 150
BSNT_00350 151 LKKQFVEAFGDSIEWNGKKYWVFPPYE----------------------- 177
|||||||||||||||||||||||||||
BSU01800___al 151 LKKQFVEAFGDSIEWNGKKYWVFPPYERIARLTPTDLADIKMTVKKSEYI 200
BSNT_00350 177 -------------------------------------------------- 177
BSU01800___al 201 IGIARLMASGELSREKLMKMNFKDAEKNLIKIRGIGPWTANYVLMRCLRF 250
BSNT_00350 177 -------------------------------------------------- 177
BSU01800___al 251 PTAFPIDDVGLIHSIKILRNMNRKPTKDEILEISVPWKEWQSYATFYLWR 300
BSNT_00350 177 --- 177
BSU01800___al 301 VLY 303
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