Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03924 and BSU27080

See DNA alignment / Visit BSNT_03924 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:03
# Commandline: needle
#    -asequence pep-align/BSNT_03924___levR.1.22522.seq
#    -bsequence pep-align/BSU27080___levR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03924___levR-BSU27080___levR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03924___levR-BSU27080___levR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03924___levR
# 2: BSU27080___levR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 935
# Identity:     929/935 (99.4%)
# Similarity:   931/935 (99.6%)
# Gaps:           0/935 ( 0.0%)
# Score: 4699.0
# 
#
#=======================================

BSNT_03924___      1 MRRIDKIYHQLKHNFHDSTLDHLLKIQGNSAKEIAEQLKMERSNVSFELN     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27080___le      1 MRRIDKIYHQLKHNFHDSTLDHLLKIQGNSAKEIAEQLKMERSNVSFELN     50

BSNT_03924___     51 NLVRSKKVIKIKTFPVRYIPVEIAEKLFNKKWDTEMMEVKDLQAFSGNSK    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27080___le     51 NLVRSKKVIKIKTFPVRYIPVEIAEKLFNKKWDTEMMEVKDLQAFSGNSK    100

BSNT_03924___    101 QNHQHISTNPLELMIGAKGSLKKAISQAKAAVFYPPTGLHMLLLGPTGSG    150
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU27080___le    101 QNHQHISTNPLELMIGAKGSLKKAISQAKAAVFYPPNGLHMLLLGPTGSG    150

BSNT_03924___    151 KSLFANRIYQFAIYSDILKAGAPFITFNCADYYNNPQLLLSQLFGHKKGS    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27080___le    151 KSLFANRIYQFAIYSDILKAGAPFITFNCADYYNNPQLLLSQLFGHKKGS    200

BSNT_03924___    201 FTGAAEDKAGLVEQANGGILFMDEIHRLPPEGQEMLFYFIDSGSYNRLGE    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27080___le    201 FTGAAEDKAGLVEQANGGILFMDEIHRLPPEGQEMLFYFIDSGSYNRLGE    250

BSNT_03924___    251 SEHKRTSNVLFICATTENPSSALLKTFLRRIPMTIHIPSLEERSLKERVD    300
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU27080___le    251 SEHKRTSNVLFICATTENPSSALLKTFLRRIPMTIHIPSLEERSLNERVD    300

BSNT_03924___    301 LTTFLLGKEAERIKKNLSVHIDVYNALIHSAKFGNVGQLKSNVQLVCAHG    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27080___le    301 LTTFLLGKEAERIKKNLSVHIDVYNALIHSAKFGNVGQLKSNVQLVCAHG    350

BSNT_03924___    351 FLHNLDRNEVIELTVRDLPDEIKQEWMSSSKNMQRSKAISEYVNITTIIS    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27080___le    351 FLHNLDRNEVIELTVRDLPDEIKQEWMSSSKNMQRSKAISEYVNITTIIS    400

BSNT_03924___    401 PIVEDETTKIDEDLSFNLYHLIEEKVKTLMKEGLSKKDINQYILTDVHLH    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27080___le    401 PIVEDETTKIDEDLSFNLYHLIEEKVKTLMKEGLSKKDINQYILTDVHLH    450

BSNT_03924___    451 VRSFFHHQAFQKDNLLTFVEDDVIQMTKQLKEIAEHELDCTFDRKFIYFL    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27080___le    451 VRSFFHHQAFQKDNLLTFVEDDVIQMTKQLKEIAEHELDCTFDRKFIYFL    500

BSNT_03924___    501 SMHIDAFLKRGKQIDVLNTQETDEIRDTHVKEYRVAMIFKDKIQEYFKVA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27080___le    501 SMHIDAFLKRGKQIDVLNTQETDEIRDTHVKEYRVAMIFKDKIQEYFKVA    550

BSNT_03924___    551 IPEIEVIYLTMLIHSIKSLKENKRVGIIVAAHGNSTASSMVEVATELLGS    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27080___le    551 IPEIEVIYLTMLIHSIKSLKENKRVGIIVAAHGNSTASSMVEVATELLGS    600

BSNT_03924___    601 TPIAAVDMPLTVSPSDILECVAEKMKQVDEGEGVLMLVDMGSLAMLESRL    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27080___le    601 TPIAAVDMPLTVSPSDILECVAEKMKQVDEGEGVLMLVDMGSLAMLESRL    650

BSNT_03924___    651 EEKTGISIKTISNVTTSMVLDAVRKVNYLNLNLHAIYQSVTKDFIELWER    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27080___le    651 EEKTGISIKTISNVTTSMVLDAVRKVNYLNLNLHAIYQSVTKDFIELWER    700

BSNT_03924___    701 QPAAPGKKKALVSICTTGSGTAKKLEDILTTIVNKASDTPIHILTVSSIK    750
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU27080___le    701 QPAASGKKKALVSICTTGSGTAKKLEDILTTIVNKASDTPIHILTVSSIK    750

BSNT_03924___    751 LANSIKEIEKEYEILATVGTKDPKINAPHVSLEVLIEGEGEKLIQQAITK    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27080___le    751 LANSIKEIEKEYEILATVGTKDPKINAPHVSLEVLIEGEGEKLIQQAITK    800

BSNT_03924___    801 GSIPLSNGLNEANMIVRELCEDSLKKYLVFLNPHHVIEMLLEWLQTVQDE    850
                     |||.|||||||||:|||||||||||||||||||||||:||||||||||||
BSU27080___le    801 GSISLSNGLNEANIIVRELCEDSLKKYLVFLNPHHVIDMLLEWLQTVQDE    850

BSNT_03924___    851 LGVIFNNAVLIKVIMHTAFAFERVIKQNPIAFSEEEEINDQLKEMVYVTE    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27080___le    851 LGVIFNNAVLIKVIMHTAFAFERVIKQNPIAFSEEEEINDQLKEMVYVTE    900

BSNT_03924___    901 RTLAPYEEKLGLRISDDEKLFIAAIFAEEVHGQLF    935
                     |||||||||||||||||||||||||||||||||||
BSU27080___le    901 RTLAPYEEKLGLRISDDEKLFIAAIFAEEVHGQLF    935


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.