Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04223 and BSU28940

See DNA alignment / Visit BSNT_04223 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:41
# Commandline: needle
#    -asequence pep-align/BSNT_04223___ysaA.1.22522.seq
#    -bsequence pep-align/BSU28940___ysaA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04223___ysaA-BSU28940___ysaA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04223___ysaA-BSU28940___ysaA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04223___ysaA
# 2: BSU28940___ysaA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 276
# Identity:     257/276 (93.1%)
# Similarity:   257/276 (93.1%)
# Gaps:          16/276 ( 5.8%)
# Score: 1346.0
# 
#
#=======================================

BSNT_04223___      1 MSLLAERFESEAEEKIMKAVFFDLDDTLLWDEKSVRTTFAETCLQAEKKY     50
                                     ||||||||||||||||||||||||||||||||||
BSU28940___ys      1 ----------------MKAVFFDLDDTLLWDEKSVRTTFAETCLQAEKKY     34

BSNT_04223___     51 GLDPEEFEAAVREAARELYMSYETYPYTVMIGINPFEGLWSNFSEPISEG    100
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU28940___ys     35 GLAPEEFEAAVREAARELYMSYETYPYTVMIGINPFEGLWSNFSEPISEG     84

BSNT_04223___    101 FQKLNKIVPEYRRNAWTNGLKALGIDDPAYGEYLGEFFAAERRKRPFVYD    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28940___ys     85 FQKLNKIVPEYRRNAWTNGLKALGIDDPAYGEYLGEFFAAERRKRPFVYD    134

BSNT_04223___    151 ETFAVLDQLKGKYELLLLTNGDPSLQKEKLAGVPELAPYFNEIVISGAFG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28940___ys    135 ETFAVLDQLKGKYELLLLTNGDPSLQKEKLAGVPELAPYFNEIVISGAFG    184

BSNT_04223___    201 KGKPDVSIFEHCLKLMNIENDDAIMVGDNLNTDILGASRAGIKTVWINRT    250
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU28940___ys    185 KGKPDVSIFEHCLKLMNIEKDDAIMVGDNLNTDILGASRAGIKTVWINRT    234

BSNT_04223___    251 DKKNETDVTPDYIISSLHDLFPILEK    276
                     ||||||||.|||||||||||||||||
BSU28940___ys    235 DKKNETDVKPDYIISSLHDLFPILEK    260


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