Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05474 and BSU35910
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:24
# Commandline: needle
# -asequence pep-align/BSNT_05474___rbsR.1.22522.seq
# -bsequence pep-align/BSU35910___rbsR.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05474___rbsR-BSU35910___rbsR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05474___rbsR-BSU35910___rbsR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05474___rbsR
# 2: BSU35910___rbsR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 329
# Identity: 320/329 (97.3%)
# Similarity: 323/329 (98.2%)
# Gaps: 3/329 ( 0.9%)
# Score: 1610.0
#
#
#=======================================
BSNT_05474___ 1 MATIKDVAGAAGVSVATVSRVLNDNGYVHEVTRTRVIAAMAKLNYYPNEV 50
||||||||||||||||||||.|||||||||.|||||||||||||||||||
BSU35910___rb 1 MATIKDVAGAAGVSVATVSRNLNDNGYVHEETRTRVIAAMAKLNYYPNEV 50
BSNT_05474___ 51 ARSLYKRESRLIGLLLPDITNPFFPQLARGAEDELNREGYRLIFGNSDEE 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35910___rb 51 ARSLYKRESRLIGLLLPDITNPFFPQLARGAEDELNREGYRLIFGNSDEE 100
BSNT_05474___ 101 LKKELEYLQTFKQNHVAGIIAATNYPDLEEYSGMNYPVVFLDRTLEGAPS 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU35910___rb 101 LKKELEYLQTFKQNHVAGIIAATNYPDLEEYSGMNYPVVFLDRTLEGAPS 150
BSNT_05474___ 151 VSSDGYTGGKLAAQAIIHGKSQRITLLRGPAHLPTAQDRFNGALEILKQA 200
||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU35910___rb 151 VSSDGYTGVKLAAQAIIHGKSQRITLLRGPAHLPTAQDRFNGALEILKQA 200
BSNT_05474___ 201 EVEFQVIETASFSIKDAQSMAKELFAAYPATDGVIASNDIQAAAVLHEAL 250
||:|||||||||||||||||||||||:|||||||||||||||||||||||
BSU35910___rb 201 EVDFQVIETASFSIKDAQSMAKELFASYPATDGVIASNDIQAAAVLHEAL 250
BSNT_05474___ 251 RRGKNVPEDIQIIGYDDIPQSGLLFPPLSTIKQPAYDMGREAAKLLLGII 300
|||||||||||||||||||||||||||||||||||||||:||||||||||
BSU35910___rb 251 RRGKNVPEDIQIIGYDDIPQSGLLFPPLSTIKQPAYDMGKEAAKLLLGII 300
BSNT_05474___ 301 KKQPLAETAIQMPVTYIGRKTTRKEDYDA 329
||||||||||||||||||||||||||
BSU35910___rb 301 KKQPLAETAIQMPVTYIGRKTTRKED--- 326
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