Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06253 and BSU40790

See DNA alignment / Visit BSNT_06253 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:55
# Commandline: needle
#    -asequence pep-align/BSNT_06253.1.22522.seq
#    -bsequence pep-align/BSU40790___yyaO.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06253-BSU40790___yyaO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06253-BSU40790___yyaO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06253
# 2: BSU40790___yyaO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 79
# Identity:      52/79 (65.8%)
# Similarity:    55/79 (69.6%)
# Gaps:          18/79 (22.8%)
# Score: 279.0
# 
#
#=======================================

BSNT_06253         1 MPTNNKPNRLIAEKSPYLLQHAHNPVNWFPWGDEAFEKAKRENKPVLVSI     50
                     ||..:|||||||||||||||||||||:|||||:|||.|||||||||||||
BSU40790___yy      1 MPNKSKPNRLIAEKSPYLLQHAHNPVDWFPWGEEAFAKAKRENKPVLVSI     50

BSNT_06253        51 GYS-TCHW-------CHVS----------     61
                     ||| ||||       |...          
BSU40790___yy     51 GYSTTCHWWPGIIKSCGTPLKDNRSHFKR     79


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