Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00306 and RBAM_002080
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:05
# Commandline: needle
# -asequence pep-align/BSNT_00306___ybaS.1.9828.seq
# -bsequence pep-align/RBAM_002080___ybaS.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00306___ybaS-RBAM_002080___ybaS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00306___ybaS-RBAM_002080___ybaS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00306___ybaS
# 2: RBAM_002080___ybaS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 327
# Identity: 238/327 (72.8%)
# Similarity: 267/327 (81.7%)
# Gaps: 21/327 ( 6.4%)
# Score: 1221.0
#
#
#=======================================
BSNT_00306___ 1 --------------MPLLTPTSVVLGVLLSQFLNGYEWAVPWIFAFITFA 36
||||||:||..||||||.::....|||||||||||.
RBAM_002080__ 1 MMWLQKLNQVLGRIMPLLTPSSVAAGVLLSQHISWMAGAVPWIFAFITFT 50
BSNT_00306___ 37 GSLSANFQSLRHALSHPLPMILALFVLHIFMPLFAWGSGHLIFKGDPLTI 86
||||||||||:.::..|||||:||||||||||:||||||||||.|||||:
RBAM_002080__ 51 GSLSANFQSLKRSIEKPLPMIMALFVLHIFMPVFAWGSGHLIFSGDPLTV 100
BSNT_00306___ 87 TGLTLAVVIPTGITSLIWAAMYKGNVGLTLSIILIDTVLSPLIVPLSLSL 136
|||.:.||||||||||||||||||||||||||||:||||||.|||||||:
RBAM_002080__ 101 TGLIMGVVIPTGITSLIWAAMYKGNVGLTLSIILVDTVLSPFIVPLSLSV 150
BSNT_00306___ 137 LAGAQVHMDVWGMMKGLIVMVVIPSFLGMLFNQMSSPERTASVSSALSPF 186
||||.|.||||||||||..||||||..||:.||.|.|.||.::|.:||||
RBAM_002080__ 151 LAGANVQMDVWGMMKGLAEMVVIPSIAGMIVNQFSPPVRTQAISRSLSPF 200
BSNT_00306___ 187 SKLCLMAVIAINSSAIAPYFKSIDLRFAGIAVTVFFIALTGYAAAWLIGK 236
||:|||.|||||||.||||...:|::|||||..|||||:||||.|||||:
RBAM_002080__ 201 SKICLMIVIAINSSEIAPYVTHVDIKFAGIAGMVFFIAMTGYAVAWLIGR 250
BSNT_00306___ 237 MMKRRQEEIVSLIFTGGMRNISAGAVLAVTFFPSQVAVPVVIGMLFQQIL 286
:|||.|:||||||:|||||||||||||||:||||||||||||||||||||
RBAM_002080__ 251 LMKRSQDEIVSLIYTGGMRNISAGAVLAVSFFPSQVAVPVVIGMLFQQIL 300
BSNT_00306___ 287 AALFGYMLNRFELKPMLQKA------- 306
||||||:|.||||||::.|.
RBAM_002080__ 301 AALFGYLLRRFELKPVVMKYEKNRSAT 327
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