Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00657 and RBAM_003860

See DNA alignment / Visit BSNT_00657 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:24
# Commandline: needle
#    -asequence pep-align/BSNT_00657___yczF.1.9828.seq
#    -bsequence pep-align/RBAM_003860___yczF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00657___yczF-RBAM_003860___yczF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00657___yczF-RBAM_003860___yczF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00657___yczF
# 2: RBAM_003860___yczF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 73
# Identity:      41/73 (56.2%)
# Similarity:    55/73 (75.3%)
# Gaps:           0/73 ( 0.0%)
# Score: 207.0
# 
#
#=======================================

BSNT_00657___      1 MKILGVTGVILICLLAISVLMDMLQGFSLTKAVYNNMSSFKMTTFAEWVV     50
                     ||||||:..:|...|.|||.:|||||||...||.||:|:||:|||:||::
RBAM_003860__      1 MKILGVSFFLLAACLIISVTIDMLQGFSFYGAVQNNLSAFKLTTFSEWLM     50

BSNT_00657___     51 LLFFVLVLVREIYMIYKSKKKNP     73
                     |..|.|.|:||:.::|||.||:.
RBAM_003860__     51 LFLFALFLIREMIVLYKSGKKDA     73


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