Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00716 and RBAM_004320

See DNA alignment / Visit BSNT_00716 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:29
# Commandline: needle
#    -asequence pep-align/BSNT_00716___kipA.1.9828.seq
#    -bsequence pep-align/RBAM_004320___kipA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00716___kipA-RBAM_004320___kipA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00716___kipA-RBAM_004320___kipA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00716___kipA
# 2: RBAM_004320___kipA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 337
# Identity:     257/337 (76.3%)
# Similarity:   287/337 (85.2%)
# Gaps:           0/337 ( 0.0%)
# Score: 1331.0
# 
#
#=======================================

BSNT_00716___      1 MSMKVLKPGLLTTVQDIGRTGYQKYGVLASGAMDTVSLRIANLLIGNGEN     50
                     |||||:||||||||||.|||||||||||.||||||:||||||||.||.|.
RBAM_004320__      1 MSMKVVKPGLLTTVQDTGRTGYQKYGVLGSGAMDTISLRIANLLAGNQEK     50

BSNT_00716___     51 EAGLEITMMGPGPSFHFSKQTLIAVTGADFTLRINDEEAPLWKPVLIKEN    100
                     |||||||:|||||||.||:..:||||||||.|.||.|.||||||||||||
RBAM_004320__     51 EAGLEITLMGPGPSFEFSEPAVIAVTGADFALHINGEPAPLWKPVLIKEN    100

BSNT_00716___    101 STVSFGPCKLGSRAYLAAAGGIEVPAVMDSKSTYVRGSIGGLHGRALQKE    150
                     |.|||||||:|||||||.|||.:|||||:|||||||..|||..||||||:
RBAM_004320__    101 SVVSFGPCKMGSRAYLAVAGGFDVPAVMESKSTYVRAGIGGFCGRALQKD    150

BSNT_00716___    151 DELNIGEMSALSQTILSRLSSLLGKQGFAAPKWSVSRGRFLPLKKNPVIR    200
                     |||.:|.|:..|::|...||...|:.||:||.||||...|||||||||||
RBAM_004320__    151 DELPLGRMTPCSESIAYCLSDSFGQHGFSAPDWSVSSRGFLPLKKNPVIR    200

BSNT_00716___    201 VLEGKQFAFFTEESKTRFYEEAFRVTPQSDRMGYRLKGEPLELKAPLEMV    250
                     ||||.||..||||:|.|||:|::.||||||||||||||.||||:.|||||
RBAM_004320__    201 VLEGAQFHAFTEEAKLRFYQESYTVTPQSDRMGYRLKGAPLELREPLEMV    250

BSNT_00716___    251 SEAVSFGTVQVPPDGNPIILLADRQTTGGYPRIAHIISADLPIVSQIMPG    300
                     ||||:|||||||||||||||||||||||||||:|||||||||:|:|.|||
RBAM_004320__    251 SEAVTFGTVQVPPDGNPIILLADRQTTGGYPRMAHIISADLPLVAQTMPG    300

BSNT_00716___    301 EHVQFEPVSLQEAEALAVEREQHIKELKTRMKMEWLT    337
                     ||:.|..|||:|||.|.:|:||.:||||.|:|||||.
RBAM_004320__    301 EHITFRAVSLEEAELLLLEKEQQLKELKARLKMEWLI    337


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