Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00801 and RBAM_005040

See DNA alignment / Visit BSNT_00801 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:35
# Commandline: needle
#    -asequence pep-align/BSNT_00801___rsbU.1.9828.seq
#    -bsequence pep-align/RBAM_005040___rsbU.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00801___rsbU-RBAM_005040___rsbU.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00801___rsbU-RBAM_005040___rsbU.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00801___rsbU
# 2: RBAM_005040___rsbU
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 335
# Identity:     300/335 (89.6%)
# Similarity:   323/335 (96.4%)
# Gaps:           0/335 ( 0.0%)
# Score: 1584.0
# 
#
#=======================================

BSNT_00801___      1 MDFREVIEQRYHQLLSRYIAELTETSLYQAQKFSRKTIEHQIPPEEIISI     50
                     |||||||||||||||||||||||||||||||||||||||||:||||||||
RBAM_005040__      1 MDFREVIEQRYHQLLSRYIAELTETSLYQAQKFSRKTIEHQVPPEEIISI     50

BSNT_00801___     51 HRKVLKELYPSLPEDVFHSLDFLIEVMIGYGMAYQEHQTLRGIQQEIKSE    100
                     ||||:|||||.|||||||||||||||||||||||||||:||.||||::||
RBAM_005040__     51 HRKVVKELYPDLPEDVFHSLDFLIEVMIGYGMAYQEHQSLRDIQQELRSE    100

BSNT_00801___    101 IEIAANVQQTLLGTKVPQEEALDIGAISVPAKQMSGDYYHFVKDKESINI    150
                     |||||||||||||||:|:||.|||||||||||||||||||||||||||||
RBAM_005040__    101 IEIAANVQQTLLGTKIPEEEDLDIGAISVPAKQMSGDYYHFVKDKESINI    150

BSNT_00801___    151 AIADVIGKGIPAALCMSMIKYAMDSLPETGIHPSQVLKNLNRVVEQNVDA    200
                     ||||||||||||||||||||||||||||.||||||||||||||||||||:
RBAM_005040__    151 AIADVIGKGIPAALCMSMIKYAMDSLPEIGIHPSQVLKNLNRVVEQNVDS    200

BSNT_00801___    201 SMFITMFYANYNMDNHQFTYASAGHEPGFYYSQKDNTFYDLEAKGLVLGI    250
                     ||||||||||||..||||||||||||||||||:|:..|||||||||||||
RBAM_005040__    201 SMFITMFYANYNTKNHQFTYASAGHEPGFYYSEKEKKFYDLEAKGLVLGI    250

BSNT_00801___    251 SQDYDYKQFDQHLEKGDMIVLFSDGVTECRTENGFLERPDLQKLIEEHMC    300
                     |||:||.|::||:::|||||||||||||||||||||||.|:|:::||||.
RBAM_005040__    251 SQDFDYSQYEQHMDEGDMIVLFSDGVTECRTENGFLERSDIQRMLEEHMD    300

BSNT_00801___    301 SSAQEMVKNIYDSLLKLQDFQLHDDFTLIVLRRKV    335
                     .|||:||||||||||:|||||||||||||||:|||
RBAM_005040__    301 CSAQDMVKNIYDSLLRLQDFQLHDDFTLIVLKRKV    335


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