Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00861 and RBAM_005280
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:36
# Commandline: needle
# -asequence pep-align/BSNT_00861___yddJ.1.9828.seq
# -bsequence pep-align/RBAM_005280___yddJ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00861___yddJ-RBAM_005280___yddJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00861___yddJ-RBAM_005280___yddJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00861___yddJ
# 2: RBAM_005280___yddJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 172
# Identity: 70/172 (40.7%)
# Similarity: 91/172 (52.9%)
# Gaps: 55/172 (32.0%)
# Score: 365.0
#
#
#=======================================
BSNT_00861___ 1 MFILKNLFIFLSLMMMFVLTACGGSKYDDAIDDVISQ----YKEHKGNDT 46
:|:..:.:||||||||||:||::|:.| .||.:.:..
RBAM_005280__ 1 ----------MSVTFILLLTACGGSKYDNAINEVMKQEKKVRKEMRADSD 40
BSNT_00861___ 47 EINIKRENAIVRVYEGGKYIQFAFYMPDNSSRELTTFKYYEKIGDKYEKM 96
| .||:|||:|||:.|||||.|||.|:.|||.||.:.||||:||.||:|
RBAM_005280__ 41 E--HKRDNAIIRVYDDGKYIQLAFYQPEESSRRLTAYSYYEKLGDSYEEM 88
BSNT_00861___ 97 TDMPGNGENDRLGLSRKTPDYEEAKGKETKLEE----------------- 129
..|||:|:.|||||.:|||||:|.||||||...
RBAM_005280__ 89 AHMPGDGDGDRLGLYKKTPDYKEVKGKETKTMCLFIPDRGTIVLPLSCCV 138
BSNT_00861___ 129 ---------------------- 129
RBAM_005280__ 139 RASMLKCYVDLIIKFRFKEIYL 160
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