Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05589 and RBAM_005320
See
DNA alignment /
Visit
BSNT_05589 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:05
# Commandline: needle
# -asequence pep-align/BSNT_05589___ywnB.1.9828.seq
# -bsequence pep-align/RBAM_005320___ywnB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05589___ywnB-RBAM_005320___ywnB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05589___ywnB-RBAM_005320___ywnB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05589___ywnB
# 2: RBAM_005320___ywnB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 213
# Identity: 137/213 (64.3%)
# Similarity: 176/213 (82.6%)
# Gaps: 1/213 ( 0.5%)
# Score: 720.0
#
#
#=======================================
BSNT_05589___ 1 MKIGIIGASGKAGNEILKEAKTRDHEVTAIVRNASKVQEQDVAVLEKDVF 50
||||||||:||||:.|||||.:|.||||||||:|:|::|:.:||:||::.
RBAM_005320__ 1 MKIGIIGATGKAGSLILKEAVSRGHEVTAIVRDAAKLKEEKIAVIEKNII 50
BSNT_05589___ 51 ELTVEDIKPFDAVVNAFGAAPGQEHLHVEAGRALISILKDAKHTRLLVVG 100
:||.:|:|..|..||||||..|:|..||:||||||..|| ...||.::||
RBAM_005320__ 51 DLTSDDLKKLDVAVNAFGAPLGEEQAHVDAGRALIRALK-GTDTRAVIVG 99
BSNT_05589___ 101 GAGSLFVDEAKTTRLMDTPEFPKEYLPTASNQGENLKDLQQTDSISWTFL 150
|||||:|||.||..:||||:||:.::|||..||.||::|::|..|:|||:
RBAM_005320__ 100 GAGSLYVDENKTVSVMDTPDFPEIFIPTAKGQGRNLQELKETSDINWTFI 149
BSNT_05589___ 151 SPAAFFDPAGKRTGSYQKGKDNVIVNAKGGSYISYADYAIAVLDELEHPE 200
||:|.|||.|||||.||.|||:::||:||.|||||||||||||||:|:|:
RBAM_005320__ 150 SPSAVFDPDGKRTGFYQSGKDHLLVNSKGESYISYADYAIAVLDEIENPK 199
BSNT_05589___ 201 HKNERFTVVSEAE 213
|.|||||||.|||
RBAM_005320__ 200 HINERFTVVGEAE 212
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.