Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00981 and RBAM_006000

See DNA alignment / Visit BSNT_00981 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:40
# Commandline: needle
#    -asequence pep-align/BSNT_00981___ydgK.1.9828.seq
#    -bsequence pep-align/RBAM_006000___ydgK.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00981___ydgK-RBAM_006000___ydgK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00981___ydgK-RBAM_006000___ydgK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00981___ydgK
# 2: RBAM_006000___ydgK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 409
# Identity:     361/409 (88.3%)
# Similarity:   379/409 (92.7%)
# Gaps:          13/409 ( 3.2%)
# Score: 1791.0
# 
#
#=======================================

BSNT_00981___      1 MLHNPTGKERLALAFLLGMLAILGPLNIDMYLPSFPEIAEDLSASASLVQ     50
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
RBAM_006000__      1 MLHNPTGKERLALAFLLGMLAILGPLNIDMYLPSFPEIAEDLSARASLVQ     50

BSNT_00981___     51 LSLTACLVGLTIGQLIVGPVSDAQGRRKPLLICIFLFALSSLFCALSPNI    100
                     |||||||:||||||::|||:|||:|||||||:|||||||.||||||:|||
RBAM_006000__     51 LSLTACLIGLTIGQVVVGPLSDAKGRRKPLLLCIFLFALFSLFCALAPNI    100

BSNT_00981___    101 TTLVAARFLQGFTASAGLVLSRAIVRDVFTGRELSKFFSLLMVITAVAPM    150
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
RBAM_006000__    101 TTLVIARFLQGFTASAGLVLSRAIVRDVFTGRELSKFFSLLMVITAVAPM    150

BSNT_00981___    151 VAPMTGGAILLLPFATWHTIFHVLMIIGFLLVLLIALRLKETLPPEKRIP    200
                     |||||||||||||||:|||||..|..|||||||:|||:|.||||||||||
RBAM_006000__    151 VAPMTGGAILLLPFASWHTIFLFLTFIGFLLVLIIALKLTETLPPEKRIP    200

BSNT_00981___    201 SSIGTSVKTMGSLLKDRSFMGYALTVGFIHGGSFAYVSGTPFVYQDIYGV    250
                     ||||.||:|||||||||||:||||||||||||||||||||||||||||||
RBAM_006000__    201 SSIGNSVRTMGSLLKDRSFIGYALTVGFIHGGSFAYVSGTPFVYQDIYGV    250

BSNT_00981___    251 SPQVFSILFGINGLAIISGSFIIGRFGGIIHEKSLLRIAVITAMIATAVL    300
                     ||||||:||||||||||:||||||||||||||||||||.|||||.|||||
RBAM_006000__    251 SPQVFSVLFGINGLAIITGSFIIGRFGGIIHEKSLLRIGVITAMTATAVL    300

BSNT_00981___    301 LTMTMIHGPLATLVISIFIYMITIGMVLTSTFTLAMEKQGHRAGSASALL    350
                     |.||:||||||.||||||||||||||.|||||||||||||||||||||||
RBAM_006000__    301 LVMTIIHGPLAALVISIFIYMITIGMTLTSTFTLAMEKQGHRAGSASALL    350

BSNT_00981___    351 GMLPLLLGSIVSPLVGINETTAVPMGAIMFVTAVIGSLAFFGLT------    394
                     ||||||||||||||||:||.||||||||||.|:||||:|||.||      
RBAM_006000__    351 GMLPLLLGSIVSPLVGMNEATAVPMGAIMFTTSVIGSIAFFALTTKPEKA    400

BSNT_00981___    395 -KERVGQNS    402
                      ||      
RBAM_006000__    401 KKE------    403


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