Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00983 and RBAM_006100

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:40
# Commandline: needle
#    -asequence pep-align/BSNT_00983___ydhC.1.9828.seq
#    -bsequence pep-align/RBAM_006100___ydhC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00983___ydhC-RBAM_006100___ydhC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00983___ydhC-RBAM_006100___ydhC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00983___ydhC
# 2: RBAM_006100___ydhC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 228
# Identity:     159/228 (69.7%)
# Similarity:   183/228 (80.3%)
# Gaps:           4/228 ( 1.8%)
# Score: 810.5
# 
#
#=======================================

BSNT_00983___      1 MDDFKLDKPTPYYLQFYNQLKKMIFNGTFKPGERINETQLAKSFGVSRSP     50
                     ||:||||||.|||||||:|||||||:|.||||||:|||||||.|||||||
RBAM_006100__      1 MDNFKLDKPIPYYLQFYSQLKKMIFDGIFKPGERLNETQLAKDFGVSRSP     50

BSNT_00983___     51 IREAMRLLEKDGLLKADDRNGFSITSLTAKDVDEIYKIRIPLEQLAVELV    100
                     :|||||||||||||.|||||||.|.||:.|||:||||||:.||.||||||
RBAM_006100__     51 VREAMRLLEKDGLLTADDRNGFVIYSLSVKDVEEIYKIRMSLESLAVELV    100

BSNT_00983___    101 IDEADEEELTILEKQLEETEKAIRNGTEDTEIIRLNQKFHELLVDFSHNR    150
                     ||||.|.|:.::||||.|||:||..|.::||||.||:.||.||||||.|.
RBAM_006100__    101 IDEAAESEIDLIEKQLRETEEAINKGVKETEIISLNESFHRLLVDFSRNS    150

BSNT_00983___    151 HLKNLLEHVNDLIHFCRILNYTGDHRAETILREHRRIFEEVKKKNKEAAK    200
                     .|..||||||.||||||:||:.||.|||.||.|||::|||:||.:|..|.
RBAM_006100__    151 RLAMLLEHVNVLIHFCRVLNFKGDDRAEVILHEHRKVFEEIKKGDKTKAV    200

BSNT_00983___    201 QHVLAHFNHDCEHLKHVL--EEGKEN--    224
                     |::..|..||.||||.||  ||..|:  
RBAM_006100__    201 QYMTEHLKHDEEHLKGVLRAEETDESSR    228


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