Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02069 and RBAM_006120
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:46
# Commandline: needle
# -asequence pep-align/BSNT_02069___yjiA.1.9828.seq
# -bsequence pep-align/RBAM_006120___yjiA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02069___yjiA-RBAM_006120___yjiA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02069___yjiA-RBAM_006120___yjiA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02069___yjiA
# 2: RBAM_006120___yjiA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 92
# Identity: 38/92 (41.3%)
# Similarity: 60/92 (65.2%)
# Gaps: 8/92 ( 8.7%)
# Score: 186.5
#
#
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BSNT_02069___ 1 MAAQTDYKKQVVGILLSLAFVLFVFSFSERHEKPLVEGKKQENWHTVVDK 50
|:|..:.:|..|..:|...|.:|||||||.| .|:||||.||:
RBAM_006120__ 1 MSAAGNRQKFWVMAMLIAVFAVFVFSFSENH--------SQKNWHTAVDQ 42
BSNT_02069___ 51 ASVKIYGSRLVEENKLKQKLGHKQADSILTLLKLANEKHITL 92
|||.::|.::.|:::|.:.|..::|:|:|||:||||.:|..:
RBAM_006120__ 43 ASVNVFGQQIFEKDRLAKTLDAREAESLLTLVKLANAEHHII 84
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