Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00999 and RBAM_006160

See DNA alignment / Visit BSNT_00999 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:40
# Commandline: needle
#    -asequence pep-align/BSNT_00999___ydhL.1.9828.seq
#    -bsequence pep-align/RBAM_006160___ydhL.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00999___ydhL-RBAM_006160___ydhL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00999___ydhL-RBAM_006160___ydhL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00999___ydhL
# 2: RBAM_006160___ydhL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 388
# Identity:     327/388 (84.3%)
# Similarity:   361/388 (93.0%)
# Gaps:           2/388 ( 0.5%)
# Score: 1660.0
# 
#
#=======================================

BSNT_00999___      1 MNFKVFLLAASTIAVGLVELIVGGILPQIANDLDISIVSAGQLISVFALG     50
                     ||||||||||||||||||||||||||||||:|||||||||||||||||||
RBAM_006160__      1 MNFKVFLLAASTIAVGLVELIVGGILPQIASDLDISIVSAGQLISVFALG     50

BSNT_00999___     51 YAVSGPLLLALTARIERKRLYLIALFVFFLSNLIAYFSPNFATLMVSRVL    100
                     ||||||||||:||:.|||||||||||:||||||:||||||||.|||||||
RBAM_006160__     51 YAVSGPLLLAVTAKAERKRLYLIALFIFFLSNLVAYFSPNFAVLMVSRVL    100

BSNT_00999___    101 AAMSTGLIVVLSLTIAPKIVAPEYRARAIGIIFMGFSSAIALGVPLGILI    150
                     |:|||||||||||||||||||||||||||||||||||||||||||:||:|
RBAM_006160__    101 ASMSTGLIVVLSLTIAPKIVAPEYRARAIGIIFMGFSSAIALGVPVGIII    150

BSNT_00999___    151 SDSFGWRILFLGIGLLALISMLIISIFFERIPAEKMIPFREQLKTIGNLK    200
                     |::|||||||||||:|:|:||||||:|||:||||||||||||:||||..|
RBAM_006160__    151 SNAFGWRILFLGIGVLSLVSMLIISVFFEKIPAEKMIPFREQIKTIGTAK    200

BSNT_00999___    201 IASSHLVTMFTLAGHYTLYAYFAPFLEETLHLSSFWVSICYFLFGISAVC    250
                     |||:||||:||||||||||||||||||.||||||.|||:||||||:||||
RBAM_006160__    201 IASAHLVTLFTLAGHYTLYAYFAPFLERTLHLSSVWVSVCYFLFGLSAVC    250

BSNT_00999___    251 GGPFGGALSDRLGSFKSILLVTGSFAIIMFLLPLSTSSMIFFLPVMVIWG    300
                     ||||||.|.||||:||||:|||.|||:|:|:|||:|.|:|.|||.|||||
RBAM_006160__    251 GGPFGGWLYDRLGAFKSIMLVTVSFALILFILPLTTVSLIIFLPAMVIWG    300

BSNT_00999___    301 LLSWSLAPAQQSYLIEIAPDSSDIQQSFNTSALQVGIALGSAIGGVVLDQ    350
                     |||||||||||||||:|||:||||||||||||||:||||||||||.|:.|
RBAM_006160__    301 LLSWSLAPAQQSYLIKIAPESSDIQQSFNTSALQIGIALGSAIGGGVIGQ    350

BSNT_00999___    351 TGTVVSTAWCGGSIVIIAVLFAFISLTRPVQTAKKSSL    388
                     ||:|.:||||||.||||||..|..|||||....|.:  
RBAM_006160__    351 TGSVTATAWCGGLIVIIAVALAVFSLTRPAWKTKSA--    386


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