Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01065 and RBAM_006610
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:44
# Commandline: needle
# -asequence pep-align/BSNT_01065___ydjI.1.9828.seq
# -bsequence pep-align/RBAM_006610___ydjI.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01065___ydjI-RBAM_006610___ydjI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01065___ydjI-RBAM_006610___ydjI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01065___ydjI
# 2: RBAM_006610___ydjI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 334
# Identity: 279/334 (83.5%)
# Similarity: 296/334 (88.6%)
# Gaps: 11/334 ( 3.3%)
# Score: 1481.0
#
#
#=======================================
BSNT_01065___ 1 MSFFRNQLANVVEWEEFRDDMIFYKWNNREIKKGSRLIIRPGQDAVFLNN 50
|.|||||||||||||||||||:|||||||||||||||||||||||:||.|
RBAM_006610__ 1 MGFFRNQLANVVEWEEFRDDMVFYKWNNREIKKGSRLIIRPGQDAIFLYN 50
BSNT_01065___ 51 GRVEGVFQDDGDYDIESEIIPFLSTLKGFKFGFNSGMRAEVLFVNTKEFT 100
|::||:|:||||||||||||||||||||||||||||||||||||||||||
RBAM_006610__ 51 GKIEGIFRDDGDYDIESEIIPFLSTLKGFKFGFNSGMRAEVLFVNTKEFT 100
BSNT_01065___ 101 VRWGTKQAINIPAAGMPGGMPIRANGTFNFKVQDYISLIDKIAGVKDQYF 150
|:||||.|||||||||||||||||||||||||.|||.||||||||||.|.
RBAM_006610__ 101 VKWGTKNAINIPAAGMPGGMPIRANGTFNFKVIDYIGLIDKIAGVKDSYL 150
BSNT_01065___ 151 VEDIKTRIISILDQLLMKWITREGKDMFNLQANAFDIAKGIQEDLDMRLI 200
|||||.||.||||||||||||||||||||||:|:|:|.|||||||||:||
RBAM_006610__ 151 VEDIKIRITSILDQLLMKWITREGKDMFNLQSNSFEIGKGIQEDLDMQLI 200
BSNT_01065___ 201 SDGMTVTGFQIMSFNYPQEVQEMITKNASYGMVGDVNRYQQISMTDGMAS 250
.|||::|||.|||||||||||:||||||||||||||||||||||||||:|
RBAM_006610__ 201 GDGMSITGFNIMSFNYPQEVQDMITKNASYGMVGDVNRYQQISMTDGMSS 250
BSNT_01065___ 251 GKMSGGGAASDMAGMMMGMNMANQMMNQMNQNQQAQSSGPQS-------- 292
|||:|.||||||||||||||.|||||||||||||.|....||
RBAM_006610__ 251 GKMNGSGAASDMAGMMMGMNAANQMMNQMNQNQQNQPQQDQSQQNQGTAP 300
BSNT_01065___ 293 ---TGSGSKPNFCPNCGTKTGEANFCPNCGQKLV 323
....:||.|||||||||..|||||||||||.
RBAM_006610__ 301 ANGAEGAAKPKFCPNCGTKTEGANFCPNCGQKLA 334
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