Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03933 and RBAM_006620
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:12
# Commandline: needle
# -asequence pep-align/BSNT_03933.1.9828.seq
# -bsequence pep-align/RBAM_006620___yrhL.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03933-RBAM_006620___yrhL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03933-RBAM_006620___yrhL.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03933
# 2: RBAM_006620___yrhL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 644
# Identity: 271/644 (42.1%)
# Similarity: 334/644 (51.9%)
# Gaps: 249/644 (38.7%)
# Score: 1433.0
#
#
#=======================================
BSNT_03933 0 -------------------------------------------------- 0
RBAM_006620__ 1 MSDKSLHHRYIPGLDGLRAFAVLAVIAYHLNFNWADGGFIGVDIFFVLSG 50
BSNT_03933 0 -------------------------------------------------- 0
RBAM_006620__ 51 YLITSIILPAQGNAITLDLRDFWVRRIRRLLPAAYLMIITTVIWVVLFNS 100
BSNT_03933 0 -------------------------------------------------- 0
RBAM_006620__ 101 ELLHTVRGDAVSSLFYISNWWFIFHQLSYFDSFGSPSPLKNLWSLAIEEQ 150
BSNT_03933 0 -------------------------------------------------- 0
RBAM_006620__ 151 FYIIWPFLLLAGMYICKTRARLAAAVMFLALCSAVVMSMMYVPGGDPSRV 200
BSNT_03933 1 --------------------------------------MHATEFSAFCIL 12
:|.||.:||..|
RBAM_006620__ 201 YYGTDTRSFELLLGCALALVWPMKRLSSKRLPSSMKHLLHGTELAAFAAL 250
BSNT_03933 13 VLCVYFTDEYEPFLYRGGMLFISVTAAILIACVCHPSSFLGNLLSWRPLR 62
:|||::|||||||||:||||.||:|||:|:||:||||||||::|||:|||
RBAM_006620__ 251 LLCVFYTDEYEPFLYKGGMLLISITAAVLVACLCHPSSFLGHVLSWKPLR 300
BSNT_03933 63 WLGARSYGIYLWHYPVIVLSTPVQEIGNPVFWHIVLKVIVTCILAELSYL 112
|:|.||||||||||||.|||||||||||||:||..:::..|.|||||||.
RBAM_006620__ 301 WIGTRSYGIYLWHYPVFVLSTPVQEIGNPVYWHCAVRIGATFILAELSYH 350
BSNT_03933 113 FIEKPVRTQGFRPFFRRVLIHRIKEWKTTSVISKMSIGFIIFAILIFAGG 162
|||:|:||.|||||.|||.::|..||||:||||:||:|.|:.|||:||||
RBAM_006620__ 351 FIEQPIRTAGFRPFLRRVFLNRFLEWKTSSVISRMSLGLILAAILVFAGG 400
BSNT_03933 163 LSGLAGEQKHPTKWTYS---SQETNADTSQASGDKKNAAAD---KKHNPE 206
|||:|.|:|.| :|||: .|||.|.:.:.:...:.|..| |||:.|
RBAM_006620__ 401 LSGIAEEKKQP-QWTYAQNDQQETAASSHKTADHDQPAKEDDIKKKHSGE 449
BSNT_03933 207 QKTTDSIQGQKE--NKDSGQETHKKKDTQSQQTKEPADT--AKEVLAIGD 252
:..|.|.:.:|| :|.:.::..:||:..||:|.:|..| .::||||||
RBAM_006620__ 450 KTDTASDKNKKEPTDKSNTKKNEEKKERSSQKTADPKQTQPQQDVLAIGD 499
BSNT_03933 253 SVMLDISSHLRQSLSHVTIDGKVGRQMSQALELAREYKSFNQPNKAVIIE 302
||||||:|:|||||.|||||||||||:||||:|..||.||||||||||||
RBAM_006620__ 500 SVMLDIASYLRQSLPHVTIDGKVGRQVSQALQLTSEYASFNQPNKAVIIE 549
BSNT_03933 303 LGTNGYFTNSQIEQLLQSFSKAHIYLVNTRVPRQWESKVNESLQQQAHAH 352
|||||||||||||.|:.|||||.||||||||||||||||||||::||.:.
RBAM_006620__ 550 LGTNGYFTNSQIESLISSFSKADIYLVNTRVPRQWESKVNESLRRQAESR 599
BSNT_03933 353 QNVTLVDWHTEALQHPEYFTPDGVHLVPKGAKTLTALIVQAMKS 396
:||||||||.:|||||||||||||||:|:|:|.||:||||.|||
RBAM_006620__ 600 KNVTLVDWHAKALQHPEYFTPDGVHLIPEGSKALTSLIVQTMKS 643
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