Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04128 and RBAM_007140
See
DNA alignment /
Visit
BSNT_04128 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:30
# Commandline: needle
# -asequence pep-align/BSNT_04128.1.9828.seq
# -bsequence pep-align/RBAM_007140.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04128-RBAM_007140.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04128-RBAM_007140.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04128
# 2: RBAM_007140
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 579
# Identity: 118/579 (20.4%)
# Similarity: 214/579 (37.0%)
# Gaps: 159/579 (27.5%)
# Score: 276.5
#
#
#=======================================
BSNT_04128 1 ------MNNQEIVQKLWNLCNVLRDDGITYQQYVTELTYLLFLKMMKEQE 44
...:.:.:.||:..|.|| ..:...:|...:..|:|||...::.
RBAM_007140 1 MAKKKDTKEKSMEETLWDSANKLR-GSVEASEYKHVVLGLIFLKFASDKF 49
BSNT_04128 45 TEGVIPEGYRWDDLLDKEG----LELKTFYQ-------------RLLLEL 77
.| |..:||| || :::..||. ..|:|.
RBAM_007140 50 EE-------RKAELLD-EGKEKYVDMVEFYTMKNVFYLSETSRWSYLVEN 91
BSNT_04128 78 GSSENERLRLIYSDASTSIAEPKN------------------LEKIIKSI 109
...|:..|:: |.:....|..| :.|:...|
RBAM_007140 92 AKQEDIALKI---DTALFTVEKNNPALKGALPDNYYSRLNLDVSKLASLI 138
BSNT_04128 110 DALDWYNA----KEEGLGNLYEGLLEKNASEKKSGAGQYFTPRVLIDVMV 155
|.::..|. :::.:|.:||..|.|.|..:..|.|:::||:.:::::.
RBAM_007140 139 DTINNINTIKDKQQDIVGRIYEYFLSKFALAEGKGKGEFYTPKSIVNLIA 188
BSNT_04128 156 QLIDPKIGERCADPAAGTFGFMIAADQYLKNQTDDYFDIEPQEAEFQKKE 205
::::|..| :..|||.|:.|..:.:.:::::...:..||
RBAM_007140 189 EMLEPYKG-KIYDPACGSGGMFVQSVKFIESHQGNKKDI----------- 226
BSNT_04128 206 AFVGMELVKDTHRLALMNALLHNIEGRLEQ--GDTLSGNGKWMKNFDVIL 253
:..|.|....|::||.||..:..|...|.: .||...:.......|.|:
RBAM_007140 227 SIYGQEYTTTTYKLAKMNLAIRGISANLGETAADTFFNDQHKDLKADFIM 276
BSNT_04128 254 TNPPFGTKK-GGERVSRDD---LTFETSNK-QLNFLQLIYNALKDDGNAR 298
.||||..|: ..|....|| ..:|...: ..|:..::....|...|..
RBAM_007140 277 ANPPFNQKQWRAENELTDDPRWAGYEVPPRGNANYAWILNIVSKLSENGV 326
BSNT_04128 299 AAVILPDNVLFESGIGSQIRRDLMNKCNLHTILRLPTGIFYAQGVKTNVL 348
|..:|.:..|...|...:||:.|:....:.:|:.||..:||...:...:.
RBAM_007140 327 AGFLLANGALSGGGDEYKIRKKLIENDLVESIIVLPQNMFYTTNISVTLW 376
BSNT_04128 349 FFTRG----TTDQDNT--------KDVWVYDLRTNMTSFGKRNQLTMAHF 386
...:. |.||:.: |:|...|||.....|.|: :
RBAM_007140 377 ILNKNKKARTIDQNGSLKKYRNREKEVLFMDLREMGVPFEKK-------Y 419
BSNT_04128 387 EHFMKAYVAEDRSKVED--ERWNKFSREEIAKKDDSLDIGLIADESLSSY 434
..|.: :|.:||.: ..|.:...| :.|
RBAM_007140 420 TQFSE----DDITKVTNIYHNWQQTDYE-------------------TKY 446
BSNT_04128 435 ENLPDPIESA--EEAIAK--------------------LQQAMELLNEVV 462
:|:|:...|| ||.:.| ..:.|:|:....
RBAM_007140 447 QNIPEFSYSATFEEVVNKDFSLVPSKYIEFANRDEDIDFDEKMKLIQSEF 496
BSNT_04128 463 EELRAVEEDEVVKK--------------- 476
.:|...|||. ||
RBAM_007140 497 VDLLKAEEDS--KKDLLKVFKELGYEIEL 523
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.