Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01328 and RBAM_008170

See DNA alignment / Visit BSNT_01328 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:01
# Commandline: needle
#    -asequence pep-align/BSNT_01328___yfkC.1.9828.seq
#    -bsequence pep-align/RBAM_008170___yfkC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01328___yfkC-RBAM_008170___yfkC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01328___yfkC-RBAM_008170___yfkC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01328___yfkC
# 2: RBAM_008170___yfkC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 278
# Identity:     218/278 (78.4%)
# Similarity:   259/278 (93.2%)
# Gaps:           1/278 ( 0.4%)
# Score: 1164.0
# 
#
#=======================================

BSNT_01328___      1 MKETLTEIFQNKIVDILLVAVILWIGVFIINRLVQLFFKRTDFIEEKKEK     50
                     |:.|:|:|.::|:|:|::||::|:.|||:|||.||:.||||||:||:|.|
RBAM_008170__      1 METTITDILKSKVVEIIIVALVLYAGVFLINRFVQVLFKRTDFLEERKGK     50

BSNT_01328___     51 TIESLVRSVTQYTATIGFIFYVISLFVHDFGKILAGAGVAGIVIGFGAQS    100
                     ||||||||:||||||||||||||||||||||:||||||||||||||||||
RBAM_008170__     51 TIESLVRSITQYTATIGFIFYVISLFVHDFGRILAGAGVAGIVIGFGAQS    100

BSNT_01328___    101 LIKDVLAGVFLIYERQLHKGDYVTVNNLFNGTVEEIGLRSLQIREWSGKL    150
                     ||||:|||||||||||||||||||:|||||||||||||||||||||:|||
RBAM_008170__    101 LIKDILAGVFLIYERQLHKGDYVTINNLFNGTVEEIGLRSLQIREWTGKL    150

BSNT_01328___    151 LTISNGEVRQIENYNIDFMRITESFLISFKEDPDRVYSVLEEACDMLNEE    200
                     ||||||||||::||||||||||||.:||:||||:|||:|||:||||||:|
RBAM_008170__    151 LTISNGEVRQLQNYNIDFMRITESVVISYKEDPERVYAVLEKACDMLNDE    200

BSNT_01328___    201 LRDSLKRDEFGNPTEPFQIHGITALNKINRGVEFTVKGMVKDDDYFSASL    250
                     ||||||||||.|.|||||:|||.:|||:.||:||||||||:|.:||||||
RBAM_008170__    201 LRDSLKRDEFLNATEPFQVHGIMSLNKLTRGIEFTVKGMVQDTEYFSASL    250

BSNT_01328___    251 AVRRVLVRQLYQNNVQMLEEAVRIERTQ    278
                     ||||||.|:||.||:|:|||....::: 
RBAM_008170__    251 AVRRVLARELYNNNLQLLEEMYHTQKS-    277


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