Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02364 and RBAM_013940

See DNA alignment / Visit BSNT_02364 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:05
# Commandline: needle
#    -asequence pep-align/BSNT_02364.1.9828.seq
#    -bsequence pep-align/RBAM_013940___ykuP.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02364-RBAM_013940___ykuP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02364-RBAM_013940___ykuP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02364
# 2: RBAM_013940___ykuP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 154
# Identity:     107/154 (69.5%)
# Similarity:   125/154 (81.2%)
# Gaps:           6/154 ( 3.9%)
# Score: 553.5
# 
#
#=======================================

BSNT_02364         1 MAKILLVYATMSGNTEAMADLIEKGLQEAEAEVDRFEAMDIDDAQLFTDY     50
                     |..:||||||||||||||||||||||.||:|.|||:||||| .|:||.||
RBAM_013940__      1 MGNVLLVYATMSGNTEAMADLIEKGLIEAQASVDRYEAMDI-HAELFNDY     49

BSNT_02364        51 DHVIMGTYTWGDGDLPDEFLDLVEDMEEIDFSGKTCAVFGSGDTAYEFFC    100
                     :::::|||||||||||||.||:.||||.::|.|||.|:||||||:|||||
RBAM_013940__     50 EYILLGTYTWGDGDLPDEMLDIAEDMENLEFIGKTFALFGSGDTSYEFFC     99

BSNT_02364       101 GAVDTLESKIKECGGDIVLPSVKIENNPEGDEEEELINFGRQFAKKSGCA    150
                     ||||.||..|...||.:|||:|||||||||.|||||..||||||  :.|:
RBAM_013940__    100 GAVDELEKVITARGGRVVLPAVKIENNPEGSEEEELREFGRQFA--ALCS    147

BSNT_02364       151 V---    151
                     .   
RBAM_013940__    148 QPAE    151


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