Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02799 and RBAM_017230

See DNA alignment / Visit BSNT_02799 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:45
# Commandline: needle
#    -asequence pep-align/BSNT_02799.1.9828.seq
#    -bsequence pep-align/RBAM_017230___ynbA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02799-RBAM_017230___ynbA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02799-RBAM_017230___ynbA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02799
# 2: RBAM_017230___ynbA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 460
# Identity:     357/460 (77.6%)
# Similarity:   390/460 (84.8%)
# Gaps:          40/460 ( 8.7%)
# Score: 1840.0
# 
#
#=======================================

BSNT_02799         1 MRGLFFARISAFQSNRFVVYTCRVWYDNTTAQYAKERNIHLNEQETIQEK     50
                                                             :||||..:|.
RBAM_017230__      1 ----------------------------------------MNEQEGKKET     10

BSNT_02799        51 AILVGCQLPHITDEHFENSMEELASLTKTADGKVLTSVTQKRNRADAATY    100
                     .|||||||||:||||||:||||||||||||||.|||.:||||||||||||
RBAM_017230__     11 VILVGCQLPHMTDEHFEHSMEELASLTKTADGTVLTRITQKRNRADAATY     60

BSNT_02799       101 IGKGKVEELKALVEELEADLLIFNDELSPSQLKSLATAIEVKMIDRTQLI    150
                     ||||||:|||||.|||||||:|||||||||||||||||||.|:|||||||
RBAM_017230__     61 IGKGKVDELKALCEELEADLIIFNDELSPSQLKSLATAIEAKIIDRTQLI    110

BSNT_02799       151 LDIFAKRARTREGKLQIELAQLQYALPRLTGQGINLSRQGGGIGARGPGE    200
                     ||||||||:||||||||||||||||||||:||||||||||||||.|||||
RBAM_017230__    111 LDIFAKRAKTREGKLQIELAQLQYALPRLSGQGINLSRQGGGIGTRGPGE    160

BSNT_02799       201 TKLETDRRHIRNRIHEINTQLSTVIRHRSRYRERRKKNGVLQIALVGYTN    250
                     ||||||||||||||||||.|||||.|||||||||||||||||.|||||||
RBAM_017230__    161 TKLETDRRHIRNRIHEINVQLSTVTRHRSRYRERRKKNGVLQAALVGYTN    210

BSNT_02799       251 AGKSTWFNRLTSADSYEEDLLFATLDPMTRKMVLPSGYSVLLSDTVGFIQ    300
                     ||||||||:|||:|||||||||||||||||||.|||||||||||||||||
RBAM_017230__    211 AGKSTWFNQLTSSDSYEEDLLFATLDPMTRKMALPSGYSVLLSDTVGFIQ    260

BSNT_02799       301 DLPTTLIAAFRSTLEEVKEADLILHLIDSSNEDYAGHEKTVLRLLEELEA    350
                     |||||||||||||||||||||||:|:||||||||||||:|||.||:||||
RBAM_017230__    261 DLPTTLIAAFRSTLEEVKEADLIIHVIDSSNEDYAGHEQTVLGLLKELEA    310

BSNT_02799       351 DDIPMLTAYNKRDQKLPDFIPSAGRDHIMVSAKFEDDAAAFKEAIQRYLR    400
                     ||||:||||||||:.||||||:||..|||:||:...|.|..|..|:.|||
RBAM_017230__    311 DDIPVLTAYNKRDETLPDFIPTAGEGHIMISARIAGDEAKLKAEIEAYLR    360

BSNT_02799       401 QELLTSFEAHVPASEGKLLSRIKSETMVDRFYFNEENEQYDISGYVQEEQ    450
                     :||:|.:|.||||:||||:||||||||:|..|||||||:|::||||||||
RBAM_017230__    361 RELMTPYEVHVPAAEGKLMSRIKSETMIDSLYFNEENERYEVSGYVQEEQ    410

BSNT_02799       451 SIIGELKKYM    460
                     ||:|||||:|
RBAM_017230__    411 SILGELKKFM    420


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