Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04401 and RBAM_018270
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:52
# Commandline: needle
# -asequence pep-align/BSNT_04401.1.9828.seq
# -bsequence pep-align/RBAM_018270___bioF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04401-RBAM_018270___bioF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04401-RBAM_018270___bioF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04401
# 2: RBAM_018270___bioF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 390
# Identity: 239/390 (61.3%)
# Similarity: 281/390 (72.1%)
# Gaps: 48/390 (12.3%)
# Score: 1206.0
#
#
#=======================================
BSNT_04401 1 -------------------------MNGAPVPERNIDGENQTVWSSNNYL 25
...| ....|:.:..|:||:||
RBAM_018270__ 1 MDFDGWLLGRLDAVKRDGLYRTLRTQETA----LKTKGQKRQTWASNDYL 46
BSNT_04401 26 GLASDRRLIDAAQTALQQFGTGSSGSRLTTGNSVWHEKLEKKIASFKRTE 75
||:.|.|||.|||||:.:||.||.||||||||:|||||||..||.||:||
RBAM_018270__ 47 GLSKDERLITAAQTAMSRFGAGSGGSRLTTGNTVWHEKLEHTIADFKQTE 96
BSNT_04401 76 AALLFSSGYLANVGVLSSLPEKEDVILSDQLNHASIIDGCRLSKADTVVY 125
||||||||||||:|||:|||:|.|||||||||||||:||||||||:|:||
RBAM_018270__ 97 AALLFSSGYLANIGVLASLPQKGDVILSDQLNHASIVDGCRLSKAETIVY 146
BSNT_04401 126 RHIDMNDLENKLNETQRYQRRFIVTDGVFSMDGTIVPLDQIISLAKRYHA 175
|||||.|||.||...|...||||||||||||||||.|||:|::|||:|.|
RBAM_018270__ 147 RHIDMADLEKKLASVQARNRRFIVTDGVFSMDGTIAPLDRIMALAKQYQA 196
BSNT_04401 176 FVVVDDAHATGVLGDSGRGTSEYFGVYPDIVIGTLSKAVGTEGGFAAGSA 225
||:.||||||||||::|.|||:||||.||:|||||||||||||||||||.
RBAM_018270__ 197 FVIADDAHATGVLGENGGGTSDYFGVCPDVVIGTLSKAVGTEGGFAAGSN 246
BSNT_04401 226 VFIDFLLNHARTFIFQTAIPPASCAAAHEAFN------------------ 257
:|||||||.|||||||||:||:.|||:|.||:
RBAM_018270__ 247 IFIDFLLNQARTFIFQTALPPSICAASHTAFDIISDMHDTRRELQSSVKM 296
BSNT_04401 258 IRTSLKNMGYVVKGDHTPIIPVVIGDAHKTVIFAEKLQGKGIYAPAIRPP 307
|:|.|.:||:.|:|..||||||:||||...|..|..|:.|||.|||||||
RBAM_018270__ 297 IKTRLADMGFTVRGGDTPIIPVIIGDAKTAVSAAALLEKKGICAPAIRPP 346
BSNT_04401 308 TVAPGESRIRITITSDHSMGDIDDLLKTFHSIGKELHII- 346
.|..||||||:|:|:|.|:.|||:|.:.|.||.|||:|.
RBAM_018270__ 347 AVPEGESRIRLTVTADRSLQDIDELTEAFDSIRKELNINK 386
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