Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04050 and RBAM_024930
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:23
# Commandline: needle
# -asequence pep-align/BSNT_04050___nifS.1.9828.seq
# -bsequence pep-align/RBAM_024930___nifS.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04050___nifS-RBAM_024930___nifS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04050___nifS-RBAM_024930___nifS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04050___nifS
# 2: RBAM_024930___nifS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 400
# Identity: 259/400 (64.8%)
# Similarity: 303/400 (75.8%)
# Gaps: 17/400 ( 4.2%)
# Score: 1400.0
#
#
#=======================================
BSNT_04050___ 1 MEEDRMIYLDYAATTPICEEALTVYQKLSMDMYGNASSLHDAGGKAKHIL 50
||||||||..|:.:||..|:|.||.::||||||||||||:|..:|
RBAM_024930__ 1 -----MIYLDYAAGAPLSKEAAKVFQHLSTEVYGNASSLHDAGGRAADVL 45
BSNT_04050___ 51 EYCREKIANIIGGEASGIYFTSGGTESNFLAIQSLLNGLPKTKRHFIMTA 100
||||.....:|||.|.||||||||||:|.||:||||.|||..|:|||.||
RBAM_024930__ 46 EYCRHSAGKLIGGAADGIYFTSGGTEANILAVQSLLQGLPDHKKHFITTA 95
BSNT_04050___ 101 MEHQSIHNCAAFLEQQGYDVTVIEPNEYGLITEEILLAHIRPETGLVSIQ 150
|||.||||.||||..:|.|||:|.|:|.|||||:||.|||||:|||||||
RBAM_024930__ 96 MEHHSIHNAAAFLADRGIDVTIIYPDENGLITEDILAAHIRPDTGLVSIQ 145
BSNT_04050___ 151 HANSETGIIQPIQRLSSYLHNKGILLHCDAVQTFGKIPINTKNLGVDALS 200
|||||||:|||:.||:::||.:.||||||.||:|||:||:....|:||||
RBAM_024930__ 146 HANSETGLIQPVNRLAAFLHQRNILLHCDCVQSFGKLPIDADQEGIDALS 195
BSNT_04050___ 201 MSSHKIHGPKGVGAVYIRPDVPWKPVYHLTTHEYGFRAGTVNVPGIGAFT 250
:|.||::||||.|||||||.|.|.|||..|.||.|||.||||||.|||||
RBAM_024930__ 196 VSGHKVYGPKGTGAVYIRPGVSWNPVYPHTVHENGFRPGTVNVPAIGAFT 245
BSNT_04050___ 251 AAAELIVSEMEKQISRNEALRTYFLDQIRIRSLPVTLAADTSKAECLPHI 300
||||..|..||:.....:.||.|..||||.:.||::.:.:.:..||||||
RBAM_024930__ 246 AAAEYAVKHMEEHREHADRLRNYLYDQIRRQGLPISFSEEETGGECLPHI 295
BSNT_04050___ 301 IGCFFHSFEGQYVMLECNRSNICISTGSACSAGYHGPSETMKALRKTEQE 350
:|||||||||||:||||||::||||||||||||.||||..||||||||:|
RBAM_024930__ 296 VGCFFHSFEGQYIMLECNRNDICISTGSACSAGSHGPSSAMKALRKTERE 345
BSNT_04050___ 351 ALQFIRISFGRHTTAEQLEQLLHTFTVLWEQKKGEFDIDRRIKANGRQQA 400
|.||.|||||..||.|||:.|:||||.||||||||..|
RBAM_024930__ 346 ARQFFRISFGNETTCEQLDMLIHTFTALWEQKKGESGI------------ 383
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