Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04077 and RBAM_025120
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:25
# Commandline: needle
# -asequence pep-align/BSNT_04077.1.9828.seq
# -bsequence pep-align/RBAM_025120___comC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04077-RBAM_025120___comC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04077-RBAM_025120___comC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04077
# 2: RBAM_025120___comC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 250
# Identity: 108/250 (43.2%)
# Similarity: 134/250 (53.6%)
# Gaps: 72/250 (28.8%)
# Score: 580.0
#
#
#=======================================
BSNT_04077 0 -------------------------------------------------- 0
RBAM_025120__ 1 MLLILFFLGLIFGSFFYTAACRIPLRISVISPRSACSFCRLPLSWGELVP 50
BSNT_04077 1 --------------------MYPAAELVTACLFAAAGIRFGTSLELFPAV 30
||||||..|||||.||||.||.|.||..|:
RBAM_025120__ 51 VVSYILQRGRCRNCRAKLSVMYPAAECWTACLFTAAGIHFGFSKELLVAL 100
BSNT_04077 31 VFISLLIIVAVTDIHFMLIPNRILIFFLPFLAAARLISPLDSWYAGLLGA 80
:|:|||:||.:||:.:||||:::|:||||...|.|:.|||||||||..||
RBAM_025120__ 101 LFLSLLMIVTMTDLQYMLIPDKVLLFFLPLFIAGRMFSPLDSWYAGFAGA 150
BSNT_04077 81 AAGFLFLAVIAAITHGGVGGGDIKLFAVIGFVLGVKMLAAAFFFSVLIGA 130
..||..|..|..::.||:|.||:|||.|||..||||::..|||.||:|||
RBAM_025120__ 151 VCGFFLLVFIMFVSKGGIGAGDVKLFGVIGLTLGVKLVLIAFFLSVMIGA 200
BSNT_04077 131 LYGAAAVLTGRLAKRQPLPFAPAIAAGSILAYLYGDSIISFYIKMALG-- 178
:||..|...|||.|:||.||||||:|||.|:||||:.:.|||||:|.|
RBAM_025120__ 201 VYGMCAAARGRLGKKQPFPFAPAISAGSALSYLYGEELFSFYIKLASGGA 250
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