Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04098 and RBAM_025260

See DNA alignment / Visit BSNT_04098 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:28
# Commandline: needle
#    -asequence pep-align/BSNT_04098___lonA.1.9828.seq
#    -bsequence pep-align/RBAM_025260___lonA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04098___lonA-RBAM_025260___lonA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04098___lonA-RBAM_025260___lonA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04098___lonA
# 2: RBAM_025260___lonA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 774
# Identity:     708/774 (91.5%)
# Similarity:   751/774 (97.0%)
# Gaps:           0/774 ( 0.0%)
# Score: 3624.0
# 
#
#=======================================

BSNT_04098___      1 MAEELKRSIPLLPLRGLLVYPTMVLHLDVGRDKSVQALEQAMMHDHMIFL     50
                     |||:.|||||||||||||||||||||||||||||||||||||||||||||
RBAM_025260__      1 MAEDTKRSIPLLPLRGLLVYPTMVLHLDVGRDKSVQALEQAMMHDHMIFL     50

BSNT_04098___     51 ATQQDISIDEPGEDEIFTVGTYTKIKQMLKLPNGTIRVLVEGLKRAQIVK    100
                     |||||||||||||::||.||||||||||||||||||||||||::||||::
RBAM_025260__     51 ATQQDISIDEPGEEDIFAVGTYTKIKQMLKLPNGTIRVLVEGIQRAQILE    100

BSNT_04098___    101 YNEHEDYTSVDIQLIHEDDSKDTEDEALMRTLLDHFDQYIKISKKISAET    150
                     |.|.||||||||||:|||||||.|||||||||||||||||||||||||||
RBAM_025260__    101 YTELEDYTSVDIQLMHEDDSKDVEDEALMRTLLDHFDQYIKISKKISAET    150

BSNT_04098___    151 YAAVTDIEEPGRMADIVASHLPLKLKDKQDILETADVKDRLNKVIDFINN    200
                     ||||||||||||||||||||||||||||||||||||:|:||||||..|:|
RBAM_025260__    151 YAAVTDIEEPGRMADIVASHLPLKLKDKQDILETADIKERLNKVIRSIHN    200

BSNT_04098___    201 EKEVLEIEKKIGQRVKRSMERTQKEYYLREQMKAIQKELGDKEGKTGEVQ    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_025260__    201 EKEVLEIEKKIGQRVKRSMERTQKEYYLREQMKAIQKELGDKEGKTGEVQ    250

BSNT_04098___    251 TLTEKIEEAGMPDHVKETALKELNRYEKIPSSSAESSVIRNYIDWLVALP    300
                     :|||||||||||:.|||||||||:||||:|||||||||||||||||:|||
RBAM_025260__    251 SLTEKIEEAGMPERVKETALKELSRYEKVPSSSAESSVIRNYIDWLIALP    300

BSNT_04098___    301 WTDETDDKLDLKEAGRLLDEEHHGLEKVKERILEYLAVQKLTKSLKGPIL    350
                     |:|||:||||:|:||.:||:||||||||||||||||||::|||:||||||
RBAM_025260__    301 WSDETEDKLDIKKAGEILDKEHHGLEKVKERILEYLAVKQLTKTLKGPIL    350

BSNT_04098___    351 CLAGPPGVGKTSLAKSIAKSLGRKFVRISLGGVRDESEIRGHRRTYVGAM    400
                     |||||||||||||||||:.|:||:||||||||||||||||||||||||||
RBAM_025260__    351 CLAGPPGVGKTSLAKSISTSMGRRFVRISLGGVRDESEIRGHRRTYVGAM    400

BSNT_04098___    401 PGRIIQGMKKAGKLNPVFLLDEIDKMSSDFRGDPSSAMLEVLDPEQNSSF    450
                     |||||||||||||.||||||||||||||||||||||||||||||||||:|
RBAM_025260__    401 PGRIIQGMKKAGKQNPVFLLDEIDKMSSDFRGDPSSAMLEVLDPEQNSTF    450

BSNT_04098___    451 SDHYIEETFDLSKVLFIATANNLATIPGPLRDRMEIINIAGYTEIEKLEI    500
                     ||||||||||||||||||||||||:||||||||||||:::||||.|||||
RBAM_025260__    451 SDHYIEETFDLSKVLFIATANNLASIPGPLRDRMEIISLSGYTENEKLEI    500

BSNT_04098___    501 VKDHLLPKQIKEHGLKKSNLQLRDQAILDIIRYYTREAGVRSLERQLAAI    550
                     |||||||||||||||.|||||:|||||.|||||||||||||:||||:|||
RBAM_025260__    501 VKDHLLPKQIKEHGLTKSNLQIRDQAITDIIRYYTREAGVRTLERQIAAI    550

BSNT_04098___    551 CRKAAKAIVAEERKRITVTEKNLQDFIGKRIFRYGQAETEDQVGVVTGLA    600
                     |||||||||:|||||||||||||.|::|||||||||||||||:|||||||
RBAM_025260__    551 CRKAAKAIVSEERKRITVTEKNLADYLGKRIFRYGQAETEDQIGVVTGLA    600

BSNT_04098___    601 YTTVGGDTLSIEVSLSPGKGKLILTGKLGDVMRESAQAAFSYVRSKTEEL    650
                     ||||||||||||||||||||||||||||||||||||||||||||||.|:.
RBAM_025260__    601 YTTVGGDTLSIEVSLSPGKGKLILTGKLGDVMRESAQAAFSYVRSKAEQF    650

BSNT_04098___    651 GIEPDFHEKYDIHIHVPEGAVPKDGPSAGITMATALVSALTGRAVSREVG    700
                     ||:|.||||||||||||||||||||||||||||||||||||.|||.||||
RBAM_025260__    651 GIDPKFHEKYDIHIHVPEGAVPKDGPSAGITMATALVSALTDRAVKREVG    700

BSNT_04098___    701 MTGEITLRGRVLPIGGLKEKALGAHRAGLTTIIAPKDNEKDIEDIPESVR    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_025260__    701 MTGEITLRGRVLPIGGLKEKALGAHRAGLTTIIAPKDNEKDIEDIPESVR    750

BSNT_04098___    751 EGLTFILASHLDEVLEHALVGEKK    774
                     |||.||..||||:|||||||||||
RBAM_025260__    751 EGLKFIFVSHLDDVLEHALVGEKK    774


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