Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04171 and RBAM_025650

See DNA alignment / Visit BSNT_04171 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:33
# Commandline: needle
#    -asequence pep-align/BSNT_04171___mutSB.1.9828.seq
#    -bsequence pep-align/RBAM_025650___mutSB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04171___mutSB-RBAM_025650___mutSB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04171___mutSB-RBAM_025650___mutSB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04171___mutSB
# 2: RBAM_025650___mutSB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 785
# Identity:     686/785 (87.4%)
# Similarity:   742/785 (94.5%)
# Gaps:           0/785 ( 0.0%)
# Score: 3472.0
# 
#
#=======================================

BSNT_04171___      1 MQQKVLSALEFHKVKEQVIGHAASSLGKEMLLELKPSASIDEIKKQLDEV     50
                     |||||||:|||||||||:..|||||||:|.||:|||...:.:|:||||||
RBAM_025650__      1 MQQKVLSSLEFHKVKEQITAHAASSLGREKLLQLKPLTDLSDIQKQLDEV     50

BSNT_04171___     51 DEASDIIRLRGQAPFGGLVDIRGALRRAEIGSVLSPSEFTEISGLLYAVK    100
                     :|||.::||||.||||||.|||.|||||||||||:|:||||:||||||||
RBAM_025650__     51 EEASAVMRLRGHAPFGGLTDIRSALRRAEIGSVLTPAEFTELSGLLYAVK    100

BSNT_04171___    101 QMKHFITQMAEDGVDIPLIHQHAEQLITLSDLERDINSCIDDHGEVLDHA    150
                     ||||||:||.||||.||||..|||:||||.||||:|||||||||||||||
RBAM_025650__    101 QMKHFISQMTEDGVGIPLIQAHAEELITLGDLEREINSCIDDHGEVLDHA    150

BSNT_04171___    151 SETLRGIRTQLRTLESRVRDRLESMLRSSSASKMLSDTIVTIRNDRFVIP    200
                     |..|||||||||||||||||||||||||||||||||||||||||||||||
RBAM_025650__    151 SPALRGIRTQLRTLESRVRDRLESMLRSSSASKMLSDTIVTIRNDRFVIP    200

BSNT_04171___    201 VKQEYRSSYGGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIER    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_025650__    201 VKQEYRSSYGGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIER    250

BSNT_04171___    251 ILRVLTEKTAEYTEELFLDLQVLQTLDFIFAKARYAKAVKATKPIMNDTG    300
                     |||:|||.|||:|:|:..|::|||||||||||||||||:|||||:||..|
RBAM_025650__    251 ILRMLTEHTAEHTQEIAQDVEVLQTLDFIFAKARYAKAMKATKPLMNGDG    300

BSNT_04171___    301 FIRLKKARHPLLPPDQVVANDIELGRDFSTIVITGPNTGGKTVTLKTLGL    350
                     |||||||||||||.|||||||||||.|:||||||||||||||||||||||
RBAM_025650__    301 FIRLKKARHPLLPQDQVVANDIELGGDYSTIVITGPNTGGKTVTLKTLGL    350

BSNT_04171___    351 LTLMAQSGLHIPADEGSEAAVFEHVFADIGDEQSIEQSLSTFSSHMVNIV    400
                     ||:|||:|||||||||||||||::||||||||||||||||||||||||||
RBAM_025650__    351 LTIMAQAGLHIPADEGSEAAVFDNVFADIGDEQSIEQSLSTFSSHMVNIV    400

BSNT_04171___    401 GILEQVNENSLVLFDELGAGTDPQEGAALAMSILDDVHRTNARVLATTHY    450
                     .||:.|:||||||||||||||||||||||||||||:||||||||||||||
RBAM_025650__    401 NILKDVSENSLVLFDELGAGTDPQEGAALAMSILDEVHRTNARVLATTHY    450

BSNT_04171___    451 PELKAYGYNREGVMNASVEFDIETLSPTYKLLIGVPGRSNAFEISKRLGL    500
                     ||||||||||:||||||||||||||||||||||||||||||||||:||||
RBAM_025650__    451 PELKAYGYNRQGVMNASVEFDIETLSPTYKLLIGVPGRSNAFEISRRLGL    500

BSNT_04171___    501 PDHIIGQAKSEMTAEHNEVDTMIASLEQSKKRAEEELSETESIRKEAEKL    550
                     |:||||||||||||||||||.||||||:|||||:||||||||||||||||
RBAM_025650__    501 PEHIIGQAKSEMTAEHNEVDLMIASLEKSKKRADEELSETESIRKEAEKL    550

BSNT_04171___    551 HKELQQQIIELNSKKDKMLEEAEQQAAEKVKAAMKEAEDIIHELRTIKEE    600
                     ||:|||||||||::||||:|||||:||||::||..|||.||.|||:||:|
RBAM_025650__    551 HKDLQQQIIELNAQKDKMMEEAEQKAAEKLEAAANEAEQIIRELRSIKQE    600

BSNT_04171___    601 HKSFKDHELINAKKRLEGAMPAFEKSKKPEKPKAQKRDFKPGDEVKVLTF    650
                     |:|||:||||:|||||..|||||||||:||:...:||:.|||||||||||
RBAM_025650__    601 HRSFKEHELIDAKKRLGDAMPAFEKSKQPERKTEKKRELKPGDEVKVLTF    650

BSNT_04171___    651 GQKGTLLEKTGGNEWNVQIGILKMKVKEKDLEFIKSAPEQKKEKIITAVK    700
                     ||||.||||||..||||||||||||||||||||:|||||.||||.|||||
RBAM_025650__    651 GQKGALLEKTGEKEWNVQIGILKMKVKEKDLEFLKSAPEPKKEKAITAVK    700

BSNT_04171___    701 GKDYHVSLELDLRGERYENALSRVEKYLDDAVLAGYPRVSIIHGKGTGAL    750
                     |||||||||||||||||||||||||||||||||||:||||||||||||||
RBAM_025650__    701 GKDYHVSLELDLRGERYENALSRVEKYLDDAVLAGHPRVSIIHGKGTGAL    750

BSNT_04171___    751 RKGVQDLLKNHRSVKSSRFGEAGEGGSGVTVVELK    785
                     ||||||||||||||||||||||||||||||:||||
RBAM_025650__    751 RKGVQDLLKNHRSVKSSRFGEAGEGGSGVTIVELK    785


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