Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04295 and RBAM_026420

See DNA alignment / Visit BSNT_04295 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:44
# Commandline: needle
#    -asequence pep-align/BSNT_04295___tpx.1.9828.seq
#    -bsequence pep-align/RBAM_026420___tpx.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04295___tpx-RBAM_026420___tpx.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04295___tpx-RBAM_026420___tpx.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04295___tpx
# 2: RBAM_026420___tpx
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 167
# Identity:     156/167 (93.4%)
# Similarity:   164/167 (98.2%)
# Gaps:           0/167 ( 0.0%)
# Score: 806.0
# 
#
#=======================================

BSNT_04295___      1 MAEITFKGGPVTLVGQEVKVGDQAPDFTVLTNSLEEKSLADMKGKVTIIS     50
                     |||||||||.|||:|||||.||||||||||||.||||:||||||||||||
RBAM_026420__      1 MAEITFKGGAVTLIGQEVKPGDQAPDFTVLTNGLEEKTLADMKGKVTIIS     50

BSNT_04295___     51 VIPSIDTGVCDAQTRRFNEEAAKLGDVNVYTISADLPFAQARWCGANGID    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_026420__     51 VIPSIDTGVCDAQTRRFNEEAAKLGDVNVYTISADLPFAQARWCGANGID    100

BSNT_04295___    101 KVETLSDHRDMSFGEAFGVYIKELRLLARSVFVLDENGKVVYAEYVSEAT    150
                     ||||||||::|||||||||:|||||||||||||||::|||||||||||||
RBAM_026420__    101 KVETLSDHKEMSFGEAFGVHIKELRLLARSVFVLDQDGKVVYAEYVSEAT    150

BSNT_04295___    151 NHPNYEKPIEAAKALVK    167
                     |||||||||||||||:|
RBAM_026420__    151 NHPNYEKPIEAAKALIK    167


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.