Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04328 and RBAM_026840

See DNA alignment / Visit BSNT_04328 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:47
# Commandline: needle
#    -asequence pep-align/BSNT_04328___motS.1.9828.seq
#    -bsequence pep-align/RBAM_026840___ytxE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04328___motS-RBAM_026840___ytxE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04328___motS-RBAM_026840___ytxE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04328___motS
# 2: RBAM_026840___ytxE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 242
# Identity:     165/242 (68.2%)
# Similarity:   193/242 (79.8%)
# Gaps:          13/242 ( 5.4%)
# Score: 799.0
# 
#
#=======================================

BSNT_04328___      1 MKLRRERFERRNGSGKNSQSSSSWMVTFTDLITLILVFFILLFSMSQIDL     50
                     ||||:||||||| ..::|..|..|||||.||||||||||||||||||||.
RBAM_026840__      1 MKLRKERFERRN-KLEHSGGSPRWMVTFADLITLILVFFILLFSMSQIDA     49

BSNT_04328___     51 QKFKAAVDSIQKEGNGLQPDQTSIEKKNTSPSDTKKQEDQQDQLLKKVNT    100
                     :||::||.||...|:|.:|          :.||...:..:||.||:.|.|
RBAM_026840__     50 EKFQSAVSSIHTNGSGGEP----------ASSDKANENKEQDLLLQNVKT     89

BSNT_04328___    101 YIKDNHLKAQMTAKRDERGVVLVLQEAVLFDTGEAKVLKNAETLLHQIAV    150
                     |||.:||.:::|||||||||||||||||||.||:|.||||||.:||||||
RBAM_026840__     90 YIKAHHLSSKLTAKRDERGVVLVLQEAVLFQTGKADVLKNAEPVLHQIAV    139

BSNT_04328___    151 LLQTIPNDIQVEGHTDSRNISTYRYPSNWELSAARASGVIQYFTSKEKLP    200
                     ||:|||||||||||||||.||||::|||||||:|||:.||:|||:.|...
RBAM_026840__    140 LLKTIPNDIQVEGHTDSRRISTYQFPSNWELSSARAASVIRYFTANEDFS    189

BSNT_04328___    201 SKRFIAVGYADTKPVKDNKTNEHMKENRRVEIVIKKSKTTSS    242
                     :||||:.||||||||||||:..|||||||||||||  |||||
RBAM_026840__    190 AKRFISAGYADTKPVKDNKSPGHMKENRRVEIVIK--KTTSS    229


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