Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04358 and RBAM_027010
See
DNA alignment /
Visit
BSNT_04358 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:49
# Commandline: needle
# -asequence pep-align/BSNT_04358___trmB.1.9828.seq
# -bsequence pep-align/RBAM_027010___trmB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04358___trmB-RBAM_027010___trmB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04358___trmB-RBAM_027010___trmB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04358___trmB
# 2: RBAM_027010___trmB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 217
# Identity: 190/217 (87.6%)
# Similarity: 201/217 (92.6%)
# Gaps: 4/217 ( 1.8%)
# Score: 1009.0
#
#
#=======================================
BSNT_04358___ 1 MRMRHKPWADDFLAENADISISNPADYKGKWNTVFGNDNPIHIEVGTGKG 50
|||||||||:|||||||||:||:||.|||:||||||||||||||||||||
RBAM_027010__ 1 MRMRHKPWANDFLAENADIAISDPAQYKGRWNTVFGNDNPIHIEVGTGKG 50
BSNT_04358___ 51 QFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTL 100
|||||||||||||||||||||||||||||||||||.|.||:||||||:||
RBAM_027010__ 51 QFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSGAHNVRLLNIDAETL 100
BSNT_04358___ 101 TDVFEPGEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIH 150
.||||.||:|||||||||||||.||||||||:..||||||||||:.|.||
RBAM_027010__ 101 NDVFERGEIKRVYLNFSDPWPKNRHEKRRLTFKTFLKKYEEVMGETGEIH 150
BSNT_04358___ 151 FKTDNRGLFEYSLKSFSEYGLLLTYVSLDLHNSNLEGNIMTEYEEKFSAL 200
||||||||||||||||||||||||.||||||||:.:||||||||||||||
RBAM_027010__ 151 FKTDNRGLFEYSLKSFSEYGLLLTEVSLDLHNSDPKGNIMTEYEEKFSAL 200
BSNT_04358___ 201 GQPIYRAEVEWRT---- 213
|||||||||||||
RBAM_027010__ 201 GQPIYRAEVEWRTKDRL 217
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.