Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04410 and RBAM_027210
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:52
# Commandline: needle
# -asequence pep-align/BSNT_04410___amyC.1.9828.seq
# -bsequence pep-align/RBAM_027210___amyC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04410___amyC-RBAM_027210___amyC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04410___amyC-RBAM_027210___amyC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04410___amyC
# 2: RBAM_027210___amyC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 276
# Identity: 229/276 (83.0%)
# Similarity: 250/276 (90.6%)
# Gaps: 3/276 ( 1.1%)
# Score: 1180.0
#
#
#=======================================
BSNT_04410___ 1 MRAARTKSMRIITLLAAIVACAHFIPFYILLTTSLKAKGDYSSKWIFPAD 50
|:.|| |||.|||||:::|.|.:||||||||||||||||||||..|:.
RBAM_027210__ 1 MKTAR---MRIFTLLAAVISCVHIVPFYILLTTSLKAKGDYSSKWSLPSA 47
BSNT_04410___ 51 ISFHNFSEAWERASLGNSFINTMIITGFSALLLIIFGSLAAYPLARRETK 100
.||.||.|||||||||.||:||:|||..||.|||..|||||||||||.||
RBAM_027210__ 48 FSFQNFREAWERASLGQSFLNTIIITAVSAALLIFMGSLAAYPLARRNTK 97
BSNT_04410___ 101 LNKAVFALLISIMIIPPLTSMVPLYRMVVDAGMVNTHAIAIFINTAAYMP 150
|||.||.||||||||||||||||||:||.|||::||||.||.||||||||
RBAM_027210__ 98 LNKIVFGLLISIMIIPPLTSMVPLYKMVADAGLINTHAAAILINTAAYMP 147
BSNT_04410___ 151 LTVFLYSGFIRSTIPKELEEAARIDGAGMLKIFFTIVFPLLKPITATICI 200
||||||||||||:||||||||||:||||:::.|:|||||||||||||:||
RBAM_027210__ 148 LTVFLYSGFIRSSIPKELEEAARMDGAGLIRTFYTIVFPLLKPITATVCI 197
BSNT_04410___ 201 ISCVFIWNDYQFAIFFLQDQKVQTLTVAMAGFFGENANNLHLVAAAALMA 250
:||||||||||||||||||||||||||||||||||||||||||||||:||
RBAM_027210__ 198 MSCVFIWNDYQFAIFFLQDQKVQTLTVAMAGFFGENANNLHLVAAAAIMA 247
BSNT_04410___ 251 MLPMVVLFLALQKYFIAGLSSGAVKG 276
||||||||||||||||:|||||||||
RBAM_027210__ 248 MLPMVVLFLALQKYFISGLSSGAVKG 273
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