Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04444 and RBAM_027530

See DNA alignment / Visit BSNT_04444 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:55
# Commandline: needle
#    -asequence pep-align/BSNT_04444___ytpA.1.9828.seq
#    -bsequence pep-align/RBAM_027530___ytpA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04444___ytpA-RBAM_027530___ytpA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04444___ytpA-RBAM_027530___ytpA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04444___ytpA
# 2: RBAM_027530___ytpA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 259
# Identity:     225/259 (86.9%)
# Similarity:   242/259 (93.4%)
# Gaps:           0/259 ( 0.0%)
# Score: 1217.0
# 
#
#=======================================

BSNT_04444___      1 MWTWKADRPVAVIVIIHGASEYHGRYKWLIEMWRSSGYHVVMGDLPGQGT     50
                     ||||||||||..|||||||||||||||||:||||||||:|||||||||||
RBAM_027530__      1 MWTWKADRPVGTIVIIHGASEYHGRYKWLVEMWRSSGYNVVMGDLPGQGT     50

BSNT_04444___     51 TTRARGHIRSFQEYIDEVDAWIDKARTFDLPVFLLGHSMGGLVAIEWVKQ    100
                     :||||||||||||||||||.|||||||.:.||||||||||||:||||.||
RBAM_027530__     51 STRARGHIRSFQEYIDEVDIWIDKARTLEAPVFLLGHSMGGLIAIEWFKQ    100

BSNT_04444___    101 QRNPRITGIILSSPCLGLQIKVNKALDLASKGLNVIAPSLKVDSGLSIDM    150
                     |||||||.:|||||||||||||||.||.|||||||:||||:||||||.||
RBAM_027530__    101 QRNPRITALILSSPCLGLQIKVNKVLDFASKGLNVLAPSLRVDSGLSPDM    150

BSNT_04444___    151 ATRNEDVIEADQNDSLYVRKVSVRWYRELLKTIESAMVPTEAFLKVPLLV    200
                     ||||.|:|||||||||||.||||||||||||||::|||||:||||||||:
RBAM_027530__    151 ATRNADMIEADQNDSLYVTKVSVRWYRELLKTIDAAMVPTDAFLKVPLLL    200

BSNT_04444___    201 MQAGDDKLVDKTMVIKWFNGVASHNKAYREWEGLYHEIFNEPEREDVFKA    250
                     ||.||||:|||..|.|||:|||||||:||||||||||||||||||.||||
RBAM_027530__    201 MQGGDDKIVDKMKVRKWFSGVASHNKSYREWEGLYHEIFNEPERETVFKA    250

BSNT_04444___    251 ARAFTDQYI    259
                     |:|||||||
RBAM_027530__    251 AKAFTDQYI    259


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