Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_04447 and RBAM_027560

See DNA alignment / Visit BSNT_04447 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:56
# Commandline: needle
#    -asequence pep-align/BSNT_04447___asnB.1.9828.seq
#    -bsequence pep-align/RBAM_027560___asnB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04447___asnB-RBAM_027560___asnB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04447___asnB-RBAM_027560___asnB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04447___asnB
# 2: RBAM_027560___asnB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 632
# Identity:     592/632 (93.7%)
# Similarity:   613/632 (97.0%)
# Gaps:           0/632 ( 0.0%)
# Score: 3136.0
# 
#
#=======================================

BSNT_04447___      1 MCGFVGVFNKHPLAQTADQEELIKQMNQMIVHRGPDSDGYFHDEHVGFGF     50
                     |||||||||||||.||||||||||||||||||||||||||:|||||||||
RBAM_027560__      1 MCGFVGVFNKHPLTQTADQEELIKQMNQMIVHRGPDSDGYYHDEHVGFGF     50

BSNT_04447___     51 RRLSIIDVENGGQPLSYEDETYWIIFNGEIYNYIELREELEAKGYTFNTD    100
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
RBAM_027560__     51 RRLSIIDVENGGQPLSYEDEKYWIIFNGEIYNYIELREELEAKGYTFNTD    100

BSNT_04447___    101 SDTEVLLATYRHYKEEAASKLRGMFAFLIWNKNDHVLYGARDPFGIKPLY    150
                     ||||||||||||||||||||||||||||||||.|.|:|||||||||||||
RBAM_027560__    101 SDTEVLLATYRHYKEEAASKLRGMFAFLIWNKADRVMYGARDPFGIKPLY    150

BSNT_04447___    151 YTTINDQVYFASERKSLMVAQNDIEIDKEALQQYMSFQFVPEPSTLDAHV    200
                     ||||.|:|||||||||||.|||.|::|..:||||||||||||||||||.|
RBAM_027560__    151 YTTIGDKVYFASERKSLMAAQNGIDLDTASLQQYMSFQFVPEPSTLDAEV    200

BSNT_04447___    201 KKVEPGSQFTIRPDGDITFKTYFKANFKPVQTEEDKLVKEVRDAIYDSVN    250
                     |||||||||||||:|||.|||||||||||||::||||||||||||:|||.
RBAM_027560__    201 KKVEPGSQFTIRPEGDIAFKTYFKANFKPVQSDEDKLVKEVRDAIFDSVK    250

BSNT_04447___    251 VHMRSDVPVGSFLSGGIDSSFIVSVAKEFHPSLKTFSVGFEQQGFSEVDV    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_027560__    251 VHMRSDVPVGSFLSGGIDSSFIVSVAKEFHPSLKTFSVGFEQQGFSEVDV    300

BSNT_04447___    301 AKETAAALGIENISKVISPEEYMNELPKIVWHFDDPLADPAAIPLYFVAK    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_027560__    301 AKETAAALGIENISKVISPEEYMNELPKIVWHFDDPLADPAAIPLYFVAK    350

BSNT_04447___    351 EAKKHVTVALSGEGADELFGGYNIYREPLSLKPFERIPSGLKKMLLHVAA    400
                     |||||||||||||||||||||||||||||||||||||||||||||||||:
RBAM_027560__    351 EAKKHVTVALSGEGADELFGGYNIYREPLSLKPFERIPSGLKKMLLHVAS    400

BSNT_04447___    401 VMPEGMRGKSLLERGCTPLQDRYIGNAKIFEESVKKQLLKHYNPNLSYRD    450
                     ||||||||||||.||||||::|||||||||||.|||||||||||.|||||
RBAM_027560__    401 VMPEGMRGKSLLVRGCTPLEERYIGNAKIFEEPVKKQLLKHYNPELSYRD    450

BSNT_04447___    451 VTKTYFTESSSYSDINKMQYVDIHTWMRGDILLKADKMTMANSLELRVPF    500
                     |||.|||||.||||||||||||||||||||||||||||||||||||||||
RBAM_027560__    451 VTKPYFTESRSYSDINKMQYVDIHTWMRGDILLKADKMTMANSLELRVPF    500

BSNT_04447___    501 LDKVVFDVASKIPDELKTKNGTTKYLLRKAAEGIVPEHVLNRKKLGFPVP    550
                     |||||||||||||||||||||||||||||||||:||:|||||||||||||
RBAM_027560__    501 LDKVVFDVASKIPDELKTKNGTTKYLLRKAAEGVVPDHVLNRKKLGFPVP    550

BSNT_04447___    551 IRHWLKNEMNEWVRNIIQESQTDAYIHKDYVLQLLEDHCADKADNSRKIW    600
                     |||||||||||||||||:||:|||||.||||||||||||||:||||||||
RBAM_027560__    551 IRHWLKNEMNEWVRNIIRESETDAYIEKDYVLQLLEDHCADRADNSRKIW    600

BSNT_04447___    601 TVLIFMIWHSINIEKRYMPEELSHQPKEVIFV    632
                     ||||||||||||:|||.:||||:|||||||||
RBAM_027560__    601 TVLIFMIWHSINVEKRLVPEELNHQPKEVIFV    632


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.