Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04449 and RBAM_027580

See DNA alignment / Visit BSNT_04449 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:57
# Commandline: needle
#    -asequence pep-align/BSNT_04449___pckA.1.9828.seq
#    -bsequence pep-align/RBAM_027580___pckA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04449___pckA-RBAM_027580___pckA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04449___pckA-RBAM_027580___pckA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04449___pckA
# 2: RBAM_027580___pckA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 527
# Identity:     456/527 (86.5%)
# Similarity:   487/527 (92.4%)
# Gaps:           0/527 ( 0.0%)
# Score: 2414.0
# 
#
#=======================================

BSNT_04449___      1 MNSVDLTADLQALLTCPNVRHNLSAAQLTEKVLSRNEGILTSTGAVRATT     50
                     |..|||||||||||..|||.|||||.:|||||:|||||.|||||||||||
RBAM_027580__      1 MKLVDLTADLQALLASPNVHHNLSAPKLTEKVISRNEGTLTSTGAVRATT     50

BSNT_04449___     51 GAYTGRSPKDKFIVEEESTKNKIDWGPVNQPISEEAFERLYTKVVSYLKE    100
                     ||||||||||||||.|:||:|:||||.|||||||||||:||.|||||||:
RBAM_027580__     51 GAYTGRSPKDKFIVREQSTENQIDWGAVNQPISEEAFEKLYAKVVSYLKQ    100

BSNT_04449___    101 RDELFVFEGFAGADEKYRLPITVVNEFAWHNLFARQLFIRPEGNDKKTVE    150
                     ||||||||||||||||||||||||||||||||||||||||||.:::.|..
RBAM_027580__    101 RDELFVFEGFAGADEKYRLPITVVNEFAWHNLFARQLFIRPETDERDTQA    150

BSNT_04449___    151 QPFTILSAPHFKADPKTDGTHSETFIIVSFEKRTILIGGTEYAGEMKKSI    200
                     |||||||||||||||:|||||||||||||||||.||||||||||||||||
RBAM_027580__    151 QPFTILSAPHFKADPETDGTHSETFIIVSFEKRVILIGGTEYAGEMKKSI    200

BSNT_04449___    201 FSIMNFLLPERDILSMHCSANVGEKGDVALFFGLSGTGKTTLSADADRKL    250
                     |||||||||::|||.|||||||||||||||||||||||||||||||||||
RBAM_027580__    201 FSIMNFLLPQQDILPMHCSANVGEKGDVALFFGLSGTGKTTLSADADRKL    250

BSNT_04449___    251 IGDDEHGWSDTGVFNIEGGCYAKCIHLSEEKEPQIFNAIRFGSVLENVVV    300
                     ||||||||||:||||||||||||||:||||||||||.||||||||||||:
RBAM_027580__    251 IGDDEHGWSDSGVFNIEGGCYAKCINLSEEKEPQIFRAIRFGSVLENVVL    300

BSNT_04449___    301 DEDTREANYDDSFYTENTRAAYPIHMIDNIVTPSMAGHPSAIVFLTADAF    350
                     ||.|.||:||:|||||||||||||.||.|||.||:||||.||||||||||
RBAM_027580__    301 DEKTGEADYDNSFYTENTRAAYPIEMIGNIVQPSIAGHPQAIVFLTADAF    350

BSNT_04449___    351 GVLPPISKLTKEQAMYHFLSGYTSKLAGTERGVTSPETTFSTCFGSPFLP    400
                     ||||||||||||||||||||||||||||||||||||:|||||||||||||
RBAM_027580__    351 GVLPPISKLTKEQAMYHFLSGYTSKLAGTERGVTSPQTTFSTCFGSPFLP    400

BSNT_04449___    401 LPAHVYAEMLGKKIDEHGADVFLVNTGWTGGGYGTGERMKLSYTRAMVKA    450
                     |||||||||||.||||||..||||||||||||||.|||||||||||||||
RBAM_027580__    401 LPAHVYAEMLGHKIDEHGVQVFLVNTGWTGGGYGVGERMKLSYTRAMVKA    450

BSNT_04449___    451 AIEGKLEDAEMITDDIFGLHIPAHVPGVPDHILQPENTWTNKEEYKEKAV    500
                     ||||:|...:|..|.||||..|.|||||||.:|||||||::|:.|.|||:
RBAM_027580__    451 AIEGRLNQTDMTADSIFGLRSPVHVPGVPDEVLQPENTWSDKQAYNEKAL    500

BSNT_04449___    501 YLANEFKENFKKFAHTDAIAQAGGPLV    527
                     :||||||||||||:|.|:||:||||||
RBAM_027580__    501 FLANEFKENFKKFSHADSIAKAGGPLV    527


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