Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04563 and RBAM_028140
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:01
# Commandline: needle
# -asequence pep-align/BSNT_04563___yuaD.1.9828.seq
# -bsequence pep-align/RBAM_028140___yuaD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04563___yuaD-RBAM_028140___yuaD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04563___yuaD-RBAM_028140___yuaD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04563___yuaD
# 2: RBAM_028140___yuaD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 193
# Identity: 144/193 (74.6%)
# Similarity: 169/193 (87.6%)
# Gaps: 1/193 ( 0.5%)
# Score: 787.0
#
#
#=======================================
BSNT_04563___ 1 MWKRMTAKAEGLYIAETESFVTKQMDKLDFDYGGIPGDLHFGLTKKAGAR 50
||||:|||.||:|||:||.||||:||||..:|||.|||||||||||||||
RBAM_028140__ 1 MWKRITAKTEGVYIADTEQFVTKKMDKLRTEYGGFPGDLHFGLTKKAGAR 50
BSNT_04563___ 51 EPMFSRGTEIFNRRQISIVSIEECNEIALKMGVPRILPEWLGANVAVSGM 100
|||:.|||||||||||||||:|||::||.|||:..|.|||||||:|:||.
RBAM_028140__ 51 EPMYERGTEIFNRRQISIVSMEECDDIAEKMGISHIFPEWLGANIAISGF 100
BSNT_04563___ 101 PDLTSLKEGSRIIFPSGAALLCEGENDPCIQPGEVIQSYYPDKPKLTPAF 150
..||.||||||:||||||:|||||||||||||||||||:|||:|||..||
RBAM_028140__ 101 SALTPLKEGSRMIFPSGASLLCEGENDPCIQPGEVIQSFYPDQPKLAAAF 150
BSNT_04563___ 151 VRHALGIRGIVCIVERPGAVYTGDEIEVHSYQ-RKVKRKAERV 192
||||:|.|||||||||||.:.|||.:.:|||: ::.|:|.|:|
RBAM_028140__ 151 VRHAMGRRGIVCIVERPGDICTGDAVTIHSYEPKRAKKKIEKV 193
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