Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04575 and RBAM_028200
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:01
# Commandline: needle
# -asequence pep-align/BSNT_04575___yubE.1.9828.seq
# -bsequence pep-align/RBAM_028200___yubE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04575___yubE-RBAM_028200___yubE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04575___yubE-RBAM_028200___yubE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04575___yubE
# 2: RBAM_028200___yubE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 283
# Identity: 193/283 (68.2%)
# Similarity: 228/283 (80.6%)
# Gaps: 3/283 ( 1.1%)
# Score: 1014.0
#
#
#=======================================
BSNT_04575___ 1 MARKKLKKRKLLISLFFLVSIPLALFVLATTLSKPIEI-SKETEEIDEQQ 49
.||..|.|..:...|.||:...||:::...||.|.. .|..||:||||
RBAM_028200__ 1 --MKKKAKTKRGLGCLFAVSLIFGLFLVSMVFSKFIVTEEKPPEEVDEQQ 48
BSNT_04575___ 50 VFIDSLSGHAQILYEKYHVLPSITIAQAILESDWGNSELAAKANNLFGVK 99
||||||||||||||||||||||||:|||||||||||||||.||.||||||
RBAM_028200__ 49 VFIDSLSGHAQILYEKYHVLPSITLAQAILESDWGNSELAGKARNLFGVK 98
BSNT_04575___ 100 GNYKGHHVTMETDEVEKGKRKTIRAKFRKYSTFFESMDDHAQLFVRGTSW 149
|:|||.||||:|||.||||||||||||||||||||||||||:|||.||||
RBAM_028200__ 99 GDYKGKHVTMKTDEFEKGKRKTIRAKFRKYSTFFESMDDHAKLFVNGTSW 148
BSNT_04575___ 150 NKKKYKPVLEAGNYKEAATALQTSGYATDPDYADKISAIVEKYDLDEYDE 199
||||||||:||.|||.||.|||.|||||||.||:||..::|.|:|:|||:
RBAM_028200__ 149 NKKKYKPVIEADNYKTAAAALQKSGYATDPGYAEKIKDVIETYNLNEYDK 198
BSNT_04575___ 200 VNPSLKSVDLNASIKDSAVQDVWSKPSTDDRSIRLTSAQSYVGKDIKVVS 249
:|.|||:||:..:|||.|::|||||||.:..||:|.|||.:.|:.|||||
RBAM_028200__ 199 INASLKAVDMKGAIKDHAIEDVWSKPSKERHSIKLASAQKFTGQHIKVVS 248
BSNT_04575___ 250 KKQKGQSVWYQFQINDKLIGWIDDSAVEIKEAT 282
:||.|:|||||.|:.|:||||:|.:||::.|.|
RBAM_028200__ 249 EKQNGESVWYQIQVKDELIGWVDQTAVQLSEET 281
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