Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04664 and RBAM_028770

See DNA alignment / Visit BSNT_04664 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:08
# Commandline: needle
#    -asequence pep-align/BSNT_04664___comP.1.9828.seq
#    -bsequence pep-align/RBAM_028770___comP.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04664___comP-RBAM_028770___comP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04664___comP-RBAM_028770___comP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04664___comP
# 2: RBAM_028770___comP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 775
# Identity:     458/775 (59.1%)
# Similarity:   586/775 (75.6%)
# Gaps:          14/775 ( 1.8%)
# Score: 2319.0
# 
#
#=======================================

BSNT_04664___      1 MYRYINVYKYLSLVFIILSFIYVIYLSYSFAFNIFVGADVKINEQGKLEV     50
                     |....|.|   |::.|:||..|:.||:|....|:||||...:|.:.::|:
RBAM_028770__      1 MKLSKNTY---SILLILLSLSYIFYLTYINVNNLFVGATANVNNKNQIEI     47

BSNT_04664___     51 TNVLDYTDEYYSCVKKGDIILEVNGEKGSDIQ-LKSGRLVNVESLIVERD     99
                     |.|.|||..||:.||||||::::|..|..:.: ||...|.||.|:.|||.
RBAM_028770__     48 TKVSDYTMAYYAGVKKGDIVIKINQNKSVEPKDLKQNTLKNVRSMTVERS     97

BSNT_04664___    100 NKSFHLQNVSLISEENLFMYLIPVISYSICLFCIFFIYRINKVRKSTSAY    149
                     .:...|:|:||:||:|||:||||||.:.:||.||..|.:|||.:.|.||:
RBAM_028770__     98 GEIVDLKNLSLLSEDNLFVYLIPVIFFFVCLSCIILILKINKEQDSVSAF    147

BSNT_04664___    150 ILILFLLFVSVAYVSACGARRGEEISTYLLVLTLVSCPVLYIHFIYKYFI    199
                     |||:|||...:|||||.|:.:|:.||.|:.|:||:|.||.|:.|||:|..
RBAM_028770__    148 ILIIFLLTTGIAYVSAGGSSKGDIISRYVNVITLISVPVNYLLFIYQYIK    197

BSNT_04664___    200 ELGTKLFEKKILIIMYMLPLINLLLEDVLSNRLKSSAFLSNLNLISFFVL    249
                     |.|.|:|..|:.:.:|.:|:||::||  ..........:..:||:|..:|
RBAM_028770__    198 EFGYKIFNGKVFVALYTVPVINIILE--FFRHCFERGVVGKVNLVSISLL    245

BSNT_04664___    250 VLTVSILIHKGIRKFKQKEQKSILKVLAYTNIFSFSPFIVFFAVPYVFF-    298
                     .|.....|..|:.|:|:.||.:|||.....|||:||||:..:..||:.| 
RBAM_028770__    246 YLIALFFITVGLIKYKKTEQANILKTFLLINIFAFSPFVFLYVAPYIIFN    295

BSNT_04664___    299 EKYVSPFSLAAFTLVIPFSLVYQFMTNRLYNIDFVVGRLKYYGFLAITPT    348
                     :.|||.|.:|.|.|:||||||||||||::|.|||::||||||..||:|||
RBAM_028770__    296 DYYVSSFLVAPFLLLIPFSLVYQFMTNKIYEIDFIIGRLKYYSLLAVTPT    345

BSNT_04664___    349 IIVVTIFNYIQQPKDIFYLVKLTIAIYVLMFAVFYFKEIIDFRFKLKRFT    398
                     ::::||::.:|.|...||..|||:..|::|.||||.|||:||||:||||:
RBAM_028770__    346 LLIITIYDLVQDPNSEFYTFKLTLLTYIIMLAVFYSKEILDFRFRLKRFS    395

BSNT_04664___    399 EKFNYQDGIFKFTQLIKQASSVDQVLNHFKNTILEVLNIDNACVYDNSKG    448
                     ||.||||.||||||:||.|||:.||....::|:||||.:...||.: .:|
RBAM_028770__    396 EKHNYQDSIFKFTQIIKGASSLKQVFTELESTLLEVLMVSKVCVLE-VEG    444

BSNT_04664___    449 EITLLSKNNFKDLTYKNHEQY---VKNFSGDIGKIKEFKQGFIIKIGERG    495
                     ::.:  :..|.|...|..|.|   :...:.:||||.:..:||::||||||
RBAM_028770__    445 DLNV--RYFFNDNEKKLWELYSHQLAETTSEIGKIVQVDKGFLMKIGERG    492

BSNT_04664___    496 DRSFLVLCFSSYNTFKLTRDEIAWLQTLAFYTNVSLENVMKIEELMVHLE    545
                     .:|::|||.|..||.|||.|||:||:||:|||::::|||:||||||.|||
RBAM_028770__    493 TKSYIVLCLSFMNTPKLTWDEISWLKTLSFYTSITMENVLKIEELMNHLE    542

BSNT_04664___    546 DLKQQESNPVWLKKLMYTIEEKQRSDLARDLHDSVLQDLISLKRQCELFL    595
                     |||:||:|||||||||:|||||||||||||||||||||||||||||||||
RBAM_028770__    543 DLKKQETNPVWLKKLMFTIEEKQRSDLARDLHDSVLQDLISLKRQCELFL    592

BSNT_04664___    596 GDFKKGDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYDLGLV    645
                     .|||| :.||..||||||.||||||||||.||||||||||||||||||||
RBAM_028770__    593 ADFKK-EEPCHIEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDLGLV    641

BSNT_04664___    646 KALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVK    695
                     ||:|||.||||||.|||||||||||||:||||:|||||||||||||||:|
RBAM_028770__    642 KAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMK    691

BSNT_04664___    696 HSQATDVLIMLISIQNKIVLHYEDDGVGFDQEKNTEHSMSMGLSGIKERV    745
                     ||||.:|||||||||||::|||||||||.:||:....|||||||||||||
RBAM_028770__    692 HSQANEVLIMLISIQNKVILHYEDDGVGCNQEEGGGQSMSMGLSGIKERV    741

BSNT_04664___    746 RALDGRLRIETSEGKGFKADIEIEL    770
                     ||||||::|:||||.|||||||:||
RBAM_028770__    742 RALDGRMKIDTSEGNGFKADIEMEL    766


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_04664 and RBAM_028770

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
