Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04692 and RBAM_028940
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:11
# Commandline: needle
# -asequence pep-align/BSNT_04692___yukC.1.9828.seq
# -bsequence pep-align/RBAM_028940___yukC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04692___yukC-RBAM_028940___yukC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04692___yukC-RBAM_028940___yukC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04692___yukC
# 2: RBAM_028940___yukC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 453
# Identity: 286/453 (63.1%)
# Similarity: 348/453 (76.8%)
# Gaps: 27/453 ( 6.0%)
# Score: 1461.5
#
#
#=======================================
BSNT_04692___ 1 MSGKQKSYLENQLEAVAEKTDAGYTFTFQREKIKLLDGLEANVIKDINPF 50
|:|..:||||.:|:||.|:|::|:||||||||||||||||||||||.:||
RBAM_028940__ 1 MTGHNRSYLETELDAVREETESGFTFTFQREKIKLLDGLEANVIKDADPF 50
BSNT_04692___ 51 FYKEIDVTDDEVIITIQPPSSYKAFRFMKAKDKKSKWQFAYQLVQAVQQH 100
|.||:.|::|||.|||:|||||:|||::|.|||||:|||||:|||||:||
RBAM_028940__ 51 FQKEVSVSEDEVTITIKPPSSYQAFRYIKGKDKKSRWQFAYRLVQAVKQH 100
BSNT_04692___ 101 NLSRLNLIVAPENIVFDKGLTPYFLHYGVKESIPPYERDEERVWQELKAA 150
.|.|||||.|||||||||.|||||||||||||:||||.|.|||.:||||.
RBAM_028940__ 101 KLKRLNLIAAPENIVFDKALTPYFLHYGVKESLPPYEEDRERVLKELKAC 150
BSNT_04692___ 151 AALAVDGAFAFEDYLKFNETLTFSAEAKAILDTESYDDLLELIQIHIDEL 200
|||..|||:.|::|||:.|||.||.|.|::|:.|:.::|.|.||..||.|
RBAM_028940__ 151 AALVADGAYTFDEYLKYKETLHFSPEVKSVLEAETIEELEETIQTAIDSL 200
BSNT_04692___ 201 EAKAKTYIHIPRKKWNIQRYIGLGLIVLLVPALIYSMYALFFAQPKHQAI 250
|.:.||||.:|:|||.||||.||.|.|||||.|:||:|.|||||||.:||
RBAM_028940__ 201 EERDKTYIKLPKKKWKIQRYAGLALAVLLVPTLLYSLYVLFFAQPKQEAI 250
BSNT_04692___ 251 VDSNRAFLNKQYSEVISTLSKYEAESLPESVQYQLATSYVEVENLGSAKT 300
.:|||.|||:|||:||.||:||:||||||||||:||:|||.||||...:.
RBAM_028940__ 251 TESNRYFLNQQYSKVIDTLAKYDAESLPESVQYELASSYVAVENLREEQR 300
BSNT_04692___ 301 KNIENNLVTLQSDPQHFLYWIDYGRGEYKEAISIGRKLEYNDYIYFALAK 350
||| .|||||||||:|||||||.||||.:|||.|||.||||.||:..|.|
RBAM_028940__ 301 KNI-GNLVTLQSDPKHFLYWIDIGRGENEEAIKIGRNLEYNPYIWLGLTK 349
BSNT_04692___ 351 YKQQLLSEDT-NDEDIQKELDSVNSELEKAQKERQENKQSNSETSLVDTS 399
||||||::|: .|::.|||||:|.|||.||:||.:|..:...|.. ||:
RBAM_028940__ 350 YKQQLLADDSMKDDEKQKELDAVESELAKAKKEAEEQHKEAEENG--DTA 397
BSNT_04692___ 400 EEQTQTDEEKQAEEKAAEEKAAAEEKAKKEEQKKKEDEKKETEKKDEKKD 449
|.....||.|| :||| :.||.:|||||||
RBAM_028940__ 398 EASAGQDESKQ-------------DKAK---------DNKENDKKDEKKD 425
BSNT_04692___ 450 DK- 451
:|
RBAM_028940__ 426 EKK 428
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