Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04700 and RBAM_029000

See DNA alignment / Visit BSNT_04700 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:12
# Commandline: needle
#    -asequence pep-align/BSNT_04700.1.9828.seq
#    -bsequence pep-align/RBAM_029000.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04700-RBAM_029000.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04700-RBAM_029000.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04700
# 2: RBAM_029000
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 71
# Identity:      39/71 (54.9%)
# Similarity:    48/71 (67.6%)
# Gaps:           2/71 ( 2.8%)
# Score: 226.0
# 
#
#=======================================

BSNT_04700         1 MANPFENADGTYLVLVNEEGQYSLWPGFIDVPSGWTVVHEQKGREACLDY     50
                     |.||||..||:|.||||.||||||||.::|||.||.:....:.|..||:|
RBAM_029000        1 MTNPFEREDGSYHVLVNAEGQYSLWPAYLDVPGGWEIRLTNETRPVCLEY     50

BSNT_04700        51 IQSHWSDMRPNSLKAVENV--     69
                     |:::|.||||.|||..|..  
RBAM_029000       51 IETNWRDMRPESLKQAEAAKK     71


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