Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04818 and RBAM_029590
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:21
# Commandline: needle
# -asequence pep-align/BSNT_04818___yurH.1.9828.seq
# -bsequence pep-align/RBAM_029590___pucF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04818___yurH-RBAM_029590___pucF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04818___yurH-RBAM_029590___pucF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04818___yurH
# 2: RBAM_029590___pucF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 413
# Identity: 295/413 (71.4%)
# Similarity: 344/413 (83.3%)
# Gaps: 1/413 ( 0.2%)
# Score: 1562.0
#
#
#=======================================
BSNT_04818___ 1 MEKQKLSVKN-SITDYIEWLAQYGASADGGVTRLLYTKEWMDAQLAVKTE 49
||.|:||..| .|:|.|:||:|:||||.||||||||||||||||||||.:
RBAM_029590__ 1 MEHQQLSAANIGISDDIQWLSQFGASASGGVTRLLYTKEWMDAQLAVKKK 50
BSNT_04818___ 50 MSAFGLETRFDDVGNVFGRLSGTQSPDEVIVTGSHIDTVINGGKYDGAYG 99
|.||||||.|||||||||||:||:||||||:|||||||||:|||||||:|
RBAM_029590__ 51 MEAFGLETAFDDVGNVFGRLNGTESPDEVILTGSHIDTVIDGGKYDGAFG 100
BSNT_04818___ 100 VLAAMLAIKRLKETYGAPKKTLEAVSLCEEEGSRFPMTYWGSGNLTGVFS 149
|||.||||:.|.||.|.|||||||||||||||||||:|||||||:||.||
RBAM_029590__ 101 VLAGMLAIRHLHETCGRPKKTLEAVSLCEEEGSRFPITYWGSGNITGAFS 150
BSNT_04818___ 150 LQDGAEPRDESGVSLQHAMQENGFGKGVFQAAYRTDISAFVELHIEQGQT 199
|.|...|:|.||:||:.||::||||.|.:.|..||||.||:|:|||||||
RBAM_029590__ 151 LSDAETPKDASGISLREAMRQNGFGAGRYPAPLRTDIKAFLEIHIEQGQT 200
BSNT_04818___ 200 LEMSGRDLGIVTSIAGQRRYLVTLEGECNHAGTTSMKWRKDPLAASSRII 249
||.||:|:||||.|||||||.|||:||||||||||||||||||||.|.||
RBAM_029590__ 201 LERSGKDIGIVTGIAGQRRYTVTLDGECNHAGTTSMKWRKDPLAAGSSII 250
BSNT_04818___ 250 HELLLRSEELPDELRLTCGKITAEPNVANVIPGRVQFSIDIRHQHQHVLE 299
|||:|.:|..|:||||||||:|.|||:|||||||:|||:||||..:.||.
RBAM_029590__ 251 HELMLSAERQPEELRLTCGKMTVEPNMANVIPGRIQFSVDIRHPEEDVLA 300
BSNT_04818___ 300 QFHQDMVALINGICLQKGIRAVIDEYMRIEPVPMDERLKAAAFETALENG 349
.|||.:|:::..|...||:|.|||||||||||.|::.|...|.|.|.|.|
RBAM_029590__ 301 AFHQKLVSIVENISRSKGVRPVIDEYMRIEPVQMNQTLTRTAAEAAKEQG 350
BSNT_04818___ 350 FSCEEMVSGAGHDAQMIGRRYPACMLFVPSRGGVSHSPKEYTSARQLEIG 399
...|::||||||||||:||.:||||||||||||:||||.|:|.|.|||.|
RBAM_029590__ 351 ADPEKIVSGAGHDAQMLGRTFPACMLFVPSRGGISHSPLEFTPAHQLETG 400
BSNT_04818___ 400 VRALTDLLYKLAY 412
|..|.::|:||||
RBAM_029590__ 401 VLTLANVLHKLAY 413
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