Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04861 and RBAM_029870

See DNA alignment / Visit BSNT_04861 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:23
# Commandline: needle
#    -asequence pep-align/BSNT_04861___yusG.1.9828.seq
#    -bsequence pep-align/RBAM_029870___yusG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04861___yusG-RBAM_029870___yusG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04861___yusG-RBAM_029870___yusG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04861___yusG
# 2: RBAM_029870___yusG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 78
# Identity:      59/78 (75.6%)
# Similarity:    71/78 (91.0%)
# Gaps:           0/78 ( 0.0%)
# Score: 348.0
# 
#
#=======================================

BSNT_04861___      1 MAFDKQKLDVTNDVTGRFQNGRLSLYHDNEMIGQMTSMNEYELKPGYSFE     50
                     |||||||:|||.:|||||||||.||:|:||.||:||.:::||||.|:|||
RBAM_029870__      1 MAFDKQKVDVTENVTGRFQNGRFSLFHENEAIGEMTGIDQYELKQGFSFE     50

BSNT_04861___     51 NEKFYKTADVVSGDDAKYVDCDYENGWC     78
                     |:||||||||::|.|.||||||||||||
RBAM_029870__     51 NQKFYKTADVINGSDPKYVDCDYENGWC     78


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