Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04922 and RBAM_030190
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:27
# Commandline: needle
# -asequence pep-align/BSNT_04922___gerAB.1.9828.seq
# -bsequence pep-align/RBAM_030190___gerAB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04922___gerAB-RBAM_030190___gerAB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04922___gerAB-RBAM_030190___gerAB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04922___gerAB
# 2: RBAM_030190___gerAB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 366
# Identity: 245/366 (66.9%)
# Similarity: 308/366 (84.2%)
# Gaps: 1/366 ( 0.3%)
# Score: 1349.0
#
#
#=======================================
BSNT_04922___ 1 MSQKQTPLKLNTFQGISIVANTMLGAGLLTLPRALTTKANTPDGWITLIL 50
||||.|..||.::||.::::||||||||||:||||:::||:|||||.|.|
RBAM_030190__ 1 MSQKTTHNKLTSYQGTALISNTMLGAGLLTMPRALSSRANSPDGWIALCL 50
BSNT_04922___ 51 EGFIFIFFIYLNTLIQKKHQYPSLFEYLKEGLGKWIGSIIGLLICGYFLG 100
||.||||.|||||||.|||||.|||:|:.||||||.|:|:.|:||.||:|
RBAM_030190__ 51 EGVIFIFLIYLNTLIMKKHQYGSLFDYMNEGLGKWAGNIVNLMICLYFIG 100
BSNT_04922___ 101 VASFETRAMAEMVKFFLLERTPIQVIILTFICCGIYLIVGGLSDVSRLFP 150
|||||.||||||||||||||||:.|.:..||.|.:|||:||:||:.||||
RBAM_030190__ 101 VASFEARAMAEMVKFFLLERTPVPVTLFIFIACSVYLIIGGMSDIGRLFP 150
BSNT_04922___ 151 FYLTVTIIILLIVFGISFKIFDINNLRPVLGEGLGPIANSLTVVSISFLG 200
||||:||||||:||..||||||::|||||||:|..|:..||||||:||||
RBAM_030190__ 151 FYLTITIIILLVVFSFSFKIFDLDNLRPVLGQGFSPVMASLTVVSVSFLG 200
BSNT_04922___ 201 MEVMLFLPEHMKKKKYTFRYASLGFLIPIILYILTYIIVVGALTAPEVKT 250
:|:||||||::|.||:|||.:::||.|||||||:||::||||||..:|||
RBAM_030190__ 201 VEIMLFLPEYLKNKKHTFRMSAMGFGIPIILYIITYVLVVGALTTQDVKT 250
BSNT_04922___ 251 LIWPTISLFQSFELKGIFIERFESFLLVVWIIQFFTTFVIYGYFAANGLK 300
:|||||:||||||:||:||||||||||||||||||.|:|.|||||.:.|.
RBAM_030190__ 251 MIWPTIALFQSFEIKGLFIERFESFLLVVWIIQFFATYVSYGYFATSALN 300
BSNT_04922___ 301 KTFGLSTKTSMVIIGIAVFYFSLWPDDANQVMMYSDYLGYIFVSLFLLPF 350
|.|||..|..::.:|||.|:.||.|.|||::|::||.|||||:..||||.
RBAM_030190__ 301 KIFGLKQKKGIIFVGIATFFGSLMPKDANKLMLFSDILGYIFLVFFLLPL 350
BSNT_04922___ 351 ILFFIVALKRRITAK- 365
::|.:||:||::...
RBAM_030190__ 351 LMFGVVAVKRKVKKAQ 366
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