Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04929 and RBAM_030240

See DNA alignment / Visit BSNT_04929 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:28
# Commandline: needle
#    -asequence pep-align/BSNT_04929.1.9828.seq
#    -bsequence pep-align/RBAM_030240___yvqG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04929-RBAM_030240___yvqG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04929-RBAM_030240___yvqG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04929
# 2: RBAM_030240___yvqG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 290
# Identity:     131/290 (45.2%)
# Similarity:   186/290 (64.1%)
# Gaps:           1/290 ( 0.3%)
# Score: 622.0
# 
#
#=======================================

BSNT_04929         1 MKKMLGKLLITAGILVCFAVVVKDVFAAGLGFINGIEADSASASPRDIDS     50
                     ||:.:.|.|:.|.:|:|...:||:|||.....:...||:|||..||.::|
RBAM_030240__      1 MKRKIAKGLMAASVLICCLFLVKEVFAGRFFPLYETEAESASIPPRAVNS     50

BSNT_04929        51 MVIESDSKDVRIIAEERSDISAGISGDSGKLFVTENKRKLELTVKEKEFQ    100
                     :.:.|:..||:||||.|:||:|.::|.:||:||....:.|.|..|||.||
RBAM_030240__     51 LSVSSEQTDVKIIAEARNDIAANMTGPAGKMFVQSRGKTLNLKAKEKGFQ    100

BSNT_04929       101 FLNGFNRSTLIVRLPYDYKGDLAVRTSSGDLSVAGNDHLALSGLNAVSAS    150
                     |||.|.|..||||:||||..|:.|.||||.::|.||..|:|:.|...|.|
RBAM_030240__    101 FLNLFQRPLLIVRIPYDYHRDITVHTSSGSIAVDGNKGLSLAHLGVRSVS    150

BSNT_04929       151 GNTSVTDVRLQDLKVKASSGDVSISNTVSKTAGIDLASGDANLVHVSGSL    200
                     ||.|:..|:....:.|..||:::.:...:||..:.|:||...|.||:|:|
RBAM_030240__    151 GNMSLKHVKTDVFEAKGLSGNLTAAGFAAKTGAVRLSSGHVGLQHVAGAL    200

BSNT_04929       201 DVKMTSGDFNAVLKKVTGPVSVTLTSGDANVSLPQNGCFAVNALSASGYV    250
                     ||::.||..:|.|:....||||.|.||.|.:|||::|.|.|||.:|||.:
RBAM_030240__    201 DVRVASGSVDASLETADAPVSVRLASGSAAISLPKDGSFTVNAETASGRI    250

BSNT_04929       251 SSPYSFADKAHKEQHHITGTQGSGRHPIDIKTDSGDLAIR    290
                     ...||| :|..||....||.:|||..|||||..||::|::
RBAM_030240__    251 RPSYSF-EKTSKEGGAFTGMKGSGARPIDIKVTSGNIALQ    289


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